Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19p04
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   139   7e-35
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    24   3.9  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    24   3.9  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    24   3.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.8  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   6.8  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   6.8  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   6.8  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  139 bits (336), Expect = 7e-35
 Identities = 64/103 (62%), Positives = 83/103 (80%)
 Frame = +1

Query: 250 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVXATPFRQWYESHYTLPLGRXKGAKLTEAX 429
           RK RIIDVVYNASNNEL+RTKTLVKNAI+V+ A+PFRQWYESHY LPLG+ +  K  E  
Sbjct: 3   RKARIIDVVYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKRELKAGE-- 60

Query: 430 EAIINKKRSXKTARKYLARQRLAKVEGALKXQFHTGRLLACVA 558
           E +++KKR+    RKY+ RQ+ AK++ A++ QF+ GRLLAC++
Sbjct: 61  EDVLSKKRTKSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACIS 103


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 339 YNNCILDKGLCTHQ 298
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 339 YNNCILDKGLCTHQ 298
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 339 YNNCILDKGLCTHQ 298
           Y  C+LDKG CT +
Sbjct: 44  YLKCLLDKGPCTQE 57


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 128 LQTPGSALSESTPFVHVVEILSTV 199
           + TP  A++ STPF+    +LS +
Sbjct: 527 VNTPAGAINMSTPFIDSEIVLSAL 550


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 545 SKRPVWNXSFRAPSTL 498
           S +  W   FRAPSTL
Sbjct: 288 SSKADWGAQFRAPSTL 303


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 545 SKRPVWNXSFRAPSTL 498
           S +  W   FRAPSTL
Sbjct: 141 SSKADWGAQFRAPSTL 156


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 545 SKRPVWNXSFRAPSTL 498
           S +  W   FRAPSTL
Sbjct: 288 SSKADWGAQFRAPSTL 303


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,130
Number of Sequences: 2352
Number of extensions: 11594
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)