Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19o23
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p pro...    32   0.70 
BT022162-1|AAY51556.1|  395|Drosophila melanogaster IP01380p pro...    29   8.6  
AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-P...    29   8.6  

>BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p
           protein.
          Length = 841

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 421 NKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRP 522
           N+ Q  +C CR  A  +S+ +   QN W I LRP
Sbjct: 1   NRYQDVQCVCRLSAIDISSANRYFQNNWLISLRP 34


>BT022162-1|AAY51556.1|  395|Drosophila melanogaster IP01380p
           protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 356 VCKYCIMVLNWGTCLMNS--SRKNIEKMFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKV 183
           VC +CI   +     +N+   R+N    FF L  LS+ +     L  +  + ++ ++K  
Sbjct: 12  VCNHCIETFDHHCPWVNNCIGRRNYRFFFFFLVSLSIHMLSIFSLCLVYVLKIMPNIKDT 71

Query: 182 RPLPSTIKLWL 150
            P+ + I + L
Sbjct: 72  APIVAIILMGL 82


>AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-PA
           protein.
          Length = 1367

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 356 VCKYCIMVLNWGTCLMNS--SRKNIEKMFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKV 183
           VC +CI   +     +N+   R+N    FF L  LS+ +     L  +  + ++ ++K  
Sbjct: 130 VCNHCIETFDHHCPWVNNCIGRRNYRFFFFFLVSLSIHMLSIFSLCLVYVLKIMPNIKDT 189

Query: 182 RPLPSTIKLWL 150
            P+ + I + L
Sbjct: 190 APIVAIILMGL 200


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,391,711
Number of Sequences: 53049
Number of extensions: 708980
Number of successful extensions: 2138
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)