Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19o20
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 32 1.9
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 32 1.9
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 32 1.9
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 32 1.9
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 31 4.3
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 31 4.3
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 31 4.3
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 31 4.3
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 31 4.3
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 31 4.3
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 31 4.3
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG HG + +KIR S F
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTF 46
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG HG + +KIR S F
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTF 46
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG HG + +KIR S F
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTF 46
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG HG + +KIR S F
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTF 46
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG H + +KIR S F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTF 46
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG H + +KIR S F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTF 46
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG H + +KIR S F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTF 46
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG H + +KIR S F
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTF 37
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG H + +KIR S F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTF 46
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG H + +KIR S F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTF 46
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 31.1 bits (67), Expect = 4.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 658 KALKAQRKVVKGEHGKRVRKIRNSVHF 738
KALKA++ V+KG H + +KIR S F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTF 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.128 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,018,299
Number of Sequences: 237096
Number of extensions: 678489
Number of successful extensions: 1191
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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