Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19o16
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.94 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.9  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 179 NKAIFKKPASVLTHDIIYWKKLGLPVLVKE 268
           NKA FKK  + +      W KLGL +  KE
Sbjct: 386 NKASFKKIVNTVATFDETWAKLGLEINHKE 415



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +2

Query: 56  VYIFC*CFYGGYVISR*LHLFNFVLIYI-ITMAQVSFPFKKTNKAIFKKPASVLTHDIIY 232
           V+ FC C+Y   +    ++   F ++Y+ + +      F KT +    K        I++
Sbjct: 269 VFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLLGPHPTYFGKTGRKTVLKTNKYCNFIILF 328

Query: 233 WKKLGLPVLVKEFGAID 283
           +  L + V++  + ++D
Sbjct: 329 Y--LSVFVILVYYASLD 343


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 153 KSRSPLKKQTKLYLKNLHQFLLTISFTGKNLVY 251
           K   P+K +TK+YL      L+  + T  +L+Y
Sbjct: 113 KPLKPVKIRTKVYLVYCSSALVLAAMTTFHLIY 145


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 153 KSRSPLKKQTKLYLKNLHQFLLTISFTGKNLVY 251
           K   P+K +TK+YL      L+  + T  +L+Y
Sbjct: 109 KPLKPVKIRTKVYLVYCSSALVLAAMTTFHLIY 141


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 595 AAYGGCFRADGRLLVA 642
           A YGGCF  +  +L +
Sbjct: 105 AKYGGCFSGESTVLTS 120


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 433 LYYK*IQNLQICCSIVLFWL*GLF 504
           +YY    +L  CC+ ++F +  LF
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLF 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,857
Number of Sequences: 336
Number of extensions: 3359
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)