Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19o16
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   3.6  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   3.6  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    23   6.3  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +2

Query: 47  WICVYIFC*CFYGGYVISR*LHLFNFVLIYIITMAQVSFPFKKTNKA 187
           W+   +FC  F    + S  L  +  VL+ +     V +P K  N A
Sbjct: 249 WVAGNLFCKLFKLCQMFSLYLSTYVLVLVGVDRWVAVKYPMKSLNTA 295


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +2

Query: 47  WICVYIFC*CFYGGYVISR*LHLFNFVLIYIITMAQVSFPFKKTNKA 187
           W+   +FC  F    + S  L  +  VL+ +     V +P K  N A
Sbjct: 250 WVAGNLFCKLFKLCQMFSLYLSTYVLVLVGVDRWVAVKYPMKSLNTA 296


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 502 FNSVTPVAAK*LKVYDPVTKVVAKNI 579
           FN+V       +K+  PV KV+A+N+
Sbjct: 136 FNAVVRREPSAVKIAQPVHKVIAQNV 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,013
Number of Sequences: 2352
Number of extensions: 12489
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)