Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19o16
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074217-1|BAB85020.1|  506|Homo sapiens protein ( Homo sapiens ...    53   8e-07

>AK074217-1|BAB85020.1|  506|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23637 fis, clone CAS09287. ).
          Length = 506

 Score = 53.2 bits (122), Expect = 8e-07
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = +2

Query: 212 LTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRV 343
           +T D +YW     PV +KEFGA+  +DFSP  PY +A T S R+
Sbjct: 19  ITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRI 62



 Score = 37.1 bits (82), Expect = 0.054
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +1

Query: 523 AAK*LKVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGS 648
           A+  + +Y   ++   K  S+F + AY   FR DGRLLVAGS
Sbjct: 58  ASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGS 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,045,679
Number of Sequences: 237096
Number of extensions: 1705378
Number of successful extensions: 2280
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2280
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)