Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19o16
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069659-1|AAL39804.1|  535|Drosophila melanogaster LD43561p pro...    66   4e-11
AL009196-1|CAA15709.1|  535|Drosophila melanogaster EG:25E8.3 pr...    66   4e-11
AE014298-375|AAF45765.1|  535|Drosophila melanogaster CG3071-PA ...    66   4e-11

>AY069659-1|AAL39804.1|  535|Drosophila melanogaster LD43561p
           protein.
          Length = 535

 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 31/60 (51%), Positives = 37/60 (61%)
 Frame = +2

Query: 167 FKKTNKAIFKKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQ 346
           F   N   F++ A V T D +YW +L  P L+KE   IDYLDFSP +P  F  TCSVRVQ
Sbjct: 5   FLPLNTRRFRQRAQVETPDTVYWDRLAKPELLKEHNTIDYLDFSPSDPDNFVVTCSVRVQ 64



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 535 LKVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 645
           +++Y+ VT +V KN+S+F + AYG  FR DGRLL AG
Sbjct: 63  VQIYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAG 99


>AL009196-1|CAA15709.1|  535|Drosophila melanogaster EG:25E8.3
           protein.
          Length = 535

 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 31/60 (51%), Positives = 37/60 (61%)
 Frame = +2

Query: 167 FKKTNKAIFKKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQ 346
           F   N   F++ A V T D +YW +L  P L+KE   IDYLDFSP +P  F  TCSVRVQ
Sbjct: 5   FLPLNTRRFRQRAQVETPDTVYWDRLAKPELLKEHNTIDYLDFSPSDPDNFVVTCSVRVQ 64



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 535 LKVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 645
           +++Y+ VT +V KN+S+F + AYG  FR DGRLL AG
Sbjct: 63  VQIYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAG 99


>AE014298-375|AAF45765.1|  535|Drosophila melanogaster CG3071-PA
           protein.
          Length = 535

 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 31/60 (51%), Positives = 37/60 (61%)
 Frame = +2

Query: 167 FKKTNKAIFKKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQ 346
           F   N   F++ A V T D +YW +L  P L+KE   IDYLDFSP +P  F  TCSVRVQ
Sbjct: 5   FLPLNTRRFRQRAQVETPDTVYWDRLAKPELLKEHNTIDYLDFSPSDPDNFVVTCSVRVQ 64



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 535 LKVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAG 645
           +++Y+ VT +V KN+S+F + AYG  FR DGRLL AG
Sbjct: 63  VQIYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAG 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,383,312
Number of Sequences: 53049
Number of extensions: 527311
Number of successful extensions: 1172
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)