Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19o14
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.11 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    25   0.79 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.79 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 648 LKVRCVAMAIVWPLWC 695
           LK R +  A +WPLWC
Sbjct: 560 LKSRGIRTAAIWPLWC 575


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 530 PTPSYIDPGLFFAQPGILC 474
           P PS IDPG      G LC
Sbjct: 153 PNPSIIDPGPALPPAGFLC 171


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 530 PTPSYIDPGLFFAQPGILC 474
           P PS IDPG      G LC
Sbjct: 153 PNPSIIDPGPALPPTGFLC 171


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/37 (21%), Positives = 22/37 (59%)
 Frame = -1

Query: 628 ICIINVFHVPLFERVRNKQYISRQMHNVKNKLGRRRV 518
           IC   + ++ +F +  N+Q + +++     ++G+R+V
Sbjct: 323 ICYKLLSNLGIFPKTTNEQLLRKELLLFAEQMGQRQV 359


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +3

Query: 648 LKVRCVAMAIVWPLWC 695
           L  R +    +WP+WC
Sbjct: 607 LVARGLGAEAMWPVWC 622


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 65  VSQACVSTYRDLVDDTGTPRP 3
           VS  CVS   +   +TG+ RP
Sbjct: 82  VSHGCVSKILNRYQETGSIRP 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,724
Number of Sequences: 336
Number of extensions: 4035
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)