Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19o08
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.21 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -1

Query: 494 FVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLC-LCTH 318
           + L FS    ++     + F +++   F  SE +  +++     YFR +  +T C L T 
Sbjct: 353 YTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTLVTA 412

Query: 317 SSFCGIRALAVPLLL 273
             +C +    +  LL
Sbjct: 413 LVYCSLAIFVLCELL 427


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -3

Query: 573 GGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDV 457
           G +T L   +CLLH +     L+ +    G L  + + V
Sbjct: 268 GVHTLLILFSCLLHLVVTPYYLLIEVCNAGYLPFILLQV 306


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 177 ILDHLTDVLSGVGVCDLI 124
           IL H+    SG+ +CDLI
Sbjct: 252 ILWHIVGTFSGIFLCDLI 269


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 173 LIILRMFCLELVFAISLISFGSNHTFFLPHRITEAASLFC 54
           L I   +C  ++F + L+     + FF    I     LFC
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,205
Number of Sequences: 336
Number of extensions: 3182
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)