Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n19
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.83 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.83 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.83 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 700 IVPSRESCISVIWWVCSLTEWIFLPVLRS 614
           ++P     ISV WW   ++E  +LP +R+
Sbjct: 12  LIPVSVILISVGWWENFVSETSYLPFIRA 40


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 700 IVPSRESCISVIWWVCSLTEWIFLPVLRS 614
           ++P     ISV WW   ++E  +LP +R+
Sbjct: 245 LIPVSVILISVGWWENFVSETSYLPFIRA 273


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 700 IVPSRESCISVIWWVCSLTEWIFLPVLRS 614
           ++P     ISV WW   ++E  +LP +R+
Sbjct: 245 LIPVSVILISVGWWENFVSETSYLPFIRA 273


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 310  SPPPVMRLIDCQSTSRHHITPPWPLK 233
            +PP V   +D  ++S  H+ P W  K
Sbjct: 1013 APPQVTTGVDTGASSTEHMHPDWTTK 1038



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 246  GGVIWCLDVD 275
            GG+IW LD+D
Sbjct: 1734 GGMIWALDLD 1743



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 246  GGVIWCLDVD 275
            GG+IW LD+D
Sbjct: 2159 GGMIWALDLD 2168



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 246  GGVIWCLDVD 275
            GG++W LD+D
Sbjct: 2657 GGMVWALDLD 2666


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 370 LDLSVAIFLPVSRSHNLQELSPPP 299
           LD  V+I +P+S  H   E  P P
Sbjct: 383 LDKGVSIMVPISGLHYDPEYYPDP 406


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/45 (20%), Positives = 20/45 (44%)
 Frame = +3

Query: 474 RTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLI 608
           R +D   + +  +  W +TDS+   ++   + +    G    D+I
Sbjct: 259 RVLDGMAANKLNVFHWHLTDSQSFPLVSQRVPQLAKNGAYGPDMI 303


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 480 IDETVSGQAPILKWEITDSK 539
           ID   + +  +L W ITDS+
Sbjct: 238 IDGMAASKLNVLHWHITDSQ 257


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 588  HEAGDLIQWDLRTGKKIHSVKEHTHQITD 674
            H     IQ   ++G+ IH +  + H+I D
Sbjct: 927  HVCYSTIQEVSKSGELIHKIATNDHEIID 955


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 625 LVKKSTLLKSIPTKSPI 675
           L +++ LL+ +PT SP+
Sbjct: 105 LSERAALLRGVPTLSPV 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,278
Number of Sequences: 336
Number of extensions: 4564
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)