Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19n19
(728 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.55
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.7
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 23 2.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.2
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 6.8
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.0
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.0
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.4 bits (53), Expect = 0.55
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 121 SVPSHRSNITARVTCSSPPLKIQNQ 195
S S+ +N+T +T PP+K+Q+Q
Sbjct: 951 SSASNVTNVTTNLTTILPPVKVQSQ 975
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.7
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Frame = -2
Query: 349 FLPVSRSHNLQE------LSPPPVMRLIDCQSTS 266
++P S S NLQE L PP+ ++ DC +TS
Sbjct: 398 YIPESSS-NLQEKTKIDLLEIPPIRKISDCSTTS 430
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 23.4 bits (48), Expect = 2.2
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 17 PPPATCHHIVFIVIYNKLLNKILSKHETSYAARAPACHHTD 139
PP T + +V+I KL N I K + HH D
Sbjct: 85 PPNRTINSVVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDD 125
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.9
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Frame = +3
Query: 171 SAAKDSKPNVWWSLNGERLGTFNG----------HGGVIWCLDVDWQSINLITGGGDSSC 320
SAA + P V W+L+G L T NG HG VI +++ S ++ GG+ SC
Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 2.9
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Frame = +3
Query: 171 SAAKDSKPNVWWSLNGERLGTFNG----------HGGVIWCLDVDWQSINLITGGGDSSC 320
SAA + P V W+L+G L T NG HG VI +++ S ++ GG+ SC
Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +1
Query: 214 TANVLALSTATVV*YGALTSTGSQLISSQVVATVPAGYGIWRQAKILQHSNPTLL 378
T L T + S + +I+ V +P+G GI+ + + S+ T+L
Sbjct: 1089 TCTTLTSQTIRISWMSPPLSAANGVITGYKVIVIPSGGGIYTKDTKITSSSETIL 1143
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +2
Query: 17 PPPATCHHIVFIVIYNKLLNKILSKHETSYAARAPACHH 133
PP T + +V+I KL N + K + HH
Sbjct: 206 PPNRTINSVVYIEQLTKLNNAVEEKRPELTNRKGVVFHH 244
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/32 (21%), Positives = 18/32 (56%)
Frame = +3
Query: 420 YTTDKAMGHPCEVFVIDTRTIDETVSGQAPIL 515
++T K++ P +F++ D ++ + P+L
Sbjct: 82 FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML 113
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 285 INLITGGGDSSCRLWDLETG 344
IN+I D+ RLW ++TG
Sbjct: 110 INIIRVRVDACDRLWGVDTG 129
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/32 (21%), Positives = 18/32 (56%)
Frame = +3
Query: 420 YTTDKAMGHPCEVFVIDTRTIDETVSGQAPIL 515
++T K++ P +F++ D ++ + P+L
Sbjct: 82 FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,631
Number of Sequences: 438
Number of extensions: 5127
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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