Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n18
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   181   9e-46
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   181   9e-46
AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA...    31   1.0  
AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro...    30   2.3  
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA...    30   2.3  
BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    30   3.1  
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    30   3.1  
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny...    29   5.4  
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA...    29   5.4  
AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA ...    28   9.4  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  181 bits (440), Expect = 9e-46
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = +3

Query: 51  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKVV 365
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSKV+
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVL 105



 Score =  143 bits (346), Expect = 2e-34
 Identities = 64/82 (78%), Positives = 74/82 (90%)
 Frame = +3

Query: 357 KVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDR 536
           +V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDR
Sbjct: 56  QVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDR 115

Query: 537 KAILDRRAKGRLAALGKDKGKY 602
           KAIL+RR KGRLAALGKDKGKY
Sbjct: 116 KAILERRGKGRLAALGKDKGKY 137


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  181 bits (440), Expect = 9e-46
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = +3

Query: 51  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKVV 365
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSKV+
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVL 105



 Score =  143 bits (346), Expect = 2e-34
 Identities = 64/82 (78%), Positives = 74/82 (90%)
 Frame = +3

Query: 357 KVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDR 536
           +V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDR
Sbjct: 56  QVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDR 115

Query: 537 KAILDRRAKGRLAALGKDKGKY 602
           KAIL+RR KGRLAALGKDKGKY
Sbjct: 116 KAILERRGKGRLAALGKDKGKY 137


>AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA
           protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -3

Query: 455 FSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNL*RVNADICCCTIGLFSL-NPLNVYNKL 279
           FS+    +  +LF +H H+ +  LAF+V  Y    +    C     ++ L +  NVYN +
Sbjct: 809 FSIARFEMLRRLFLVHGHYNSQRLAFLVLFYCYKNIIITGCMALYQVYDLYSATNVYNSI 868

Query: 278 F 276
           +
Sbjct: 869 Y 869


>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p protein.
          Length = 2019

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 24/100 (24%), Positives = 43/100 (43%)
 Frame = +3

Query: 63   KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 242
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 243  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKV 362
               GK+    R   V      Q ++ + A A  G  PS V
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPSSV 1811


>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
            protein.
          Length = 2019

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 24/100 (24%), Positives = 43/100 (43%)
 Frame = +3

Query: 63   KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 242
            ++  SS R  ++R+ S  + +   + SS ++ +     ++      K   +Q + GH KG
Sbjct: 1714 RRAKSSSRGPQERYSSDQNSLAESMKSSVITNKTISHESLSGSS--KLARIQQINGHSKG 1771

Query: 243  QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKV 362
               GK+    R   V      Q ++ + A A  G  PS V
Sbjct: 1772 AATGKIKATQRGSTVGNKSTRQLKQQHNAMASNGSSPSSV 1811


>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 204 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 293
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 204 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 293
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
           cyclase protein.
          Length = 2248

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 599 FTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL-*RVNADICCCTIGL 456
           FT++ ++CS   L   + + F  F  L  DNH L  ++  D   C  GL
Sbjct: 284 FTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGL 332


>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
           protein.
          Length = 2248

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 599 FTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL-*RVNADICCCTIGL 456
           FT++ ++CS   L   + + F  F  L  DNH L  ++  D   C  GL
Sbjct: 284 FTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGL 332


>AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA
            protein.
          Length = 1340

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 480  HMLLHHWPFLFESSQCIQQTFYDTPASLCQPVGLCSVHVQPLKG 349
            H+L + WP +FE+S  + Q F D+   L   +G   +    L+G
Sbjct: 1246 HLLNYVWPNIFETSPHLVQAFMDSVDGLRVSLGPIKILQYTLQG 1289


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,261,914
Number of Sequences: 53049
Number of extensions: 707992
Number of successful extensions: 1718
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)