Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19n17
(270 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 117 4e-26
UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodei... 101 2e-21
UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa ... 95 2e-19
UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep: B... 95 4e-19
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 86 2e-16
UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20... 65 3e-10
UniRef50_A0E1R2 Cluster: Chromosome undetermined scaffold_73, wh... 38 0.058
UniRef50_Q5UP83 Cluster: Putative KilA-N domain-containing prote... 36 0.13
UniRef50_A7HZS8 Cluster: Cpp14; n=1; Campylobacter hominis ATCC ... 34 0.71
UniRef50_A0BGK0 Cluster: Chromosome undetermined scaffold_106, w... 32 2.9
UniRef50_Q2AIN1 Cluster: Glycosyl transferase, group 1; n=1; Hal... 31 6.6
UniRef50_Q93ZM1 Cluster: At2g16400/F16F14.10; n=2; Arabidopsis t... 31 6.6
UniRef50_Q86LG6 Cluster: Pickpocket 19; n=3; Sophophora|Rep: Pic... 31 6.6
UniRef50_Q2GQP7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_UPI00006CFFC9 Cluster: hypothetical protein TTHERM_0075... 30 8.8
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 117 bits (282), Expect = 4e-26
Identities = 57/75 (76%), Positives = 66/75 (88%), Gaps = 2/75 (2%)
Frame = +2
Query: 2 SLNRSIKRLG--SSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQL 175
SL RS+ RL D+VF SDYVPNA+NVLNKVKETLPR+++KAKHNKITLL NLTREQL
Sbjct: 252 SLQRSLNRLSVDERDIVFKSDYVPNAVNVLNKVKETLPRDKFKAKHNKITLLDNLTREQL 311
Query: 176 IDAVQSSMTERQIAR 220
++AVQ+SMTERQIAR
Sbjct: 312 VEAVQASMTERQIAR 326
>UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 517
Score = 101 bits (243), Expect = 2e-21
Identities = 47/74 (63%), Positives = 63/74 (85%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 SLNRSIKRLG--SSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQL 175
SL RS+ RL S ++F S+YVPNAMNVLNKVKE+LP++++ A+HNKITLL++LTRE L
Sbjct: 434 SLKRSLDRLSIDESQILFKSNYVPNAMNVLNKVKESLPKDKFTARHNKITLLEDLTREDL 493
Query: 176 IDAVQSSMTERQIA 217
++A+ SSMTERQ+A
Sbjct: 494 VEAINSSMTERQVA 507
>UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa
armigera nucleopolyhedrovirus G4
Length = 527
Score = 95.5 bits (227), Expect = 2e-19
Identities = 43/74 (58%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 SLNRSIKRLG--SSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQL 175
SL RS+ RL D+V+ SDYVPN+MNVLNKVKE LP+ +YKA+HN+ITL ++LTRE L
Sbjct: 434 SLKRSLDRLSVDEKDIVYKSDYVPNSMNVLNKVKERLPKEKYKARHNRITLHEDLTREDL 493
Query: 176 IDAVQSSMTERQIA 217
+ A++S+++ RQ+A
Sbjct: 494 LQAIESTVSSRQVA 507
>UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep:
BRO-b - Mamestra configurata NPV-A
Length = 372
Score = 94.7 bits (225), Expect = 4e-19
Identities = 42/74 (56%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 SLNRSIKRLG--SSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQL 175
SL RS+ RL D+V+ SDYVPN +NVLNKVKE LP++++ A+HNKITLL ++T+E+L
Sbjct: 293 SLKRSLDRLAVEERDIVYKSDYVPNGVNVLNKVKEALPKDKFTARHNKITLLNDMTKEEL 352
Query: 176 IDAVQSSMTERQIA 217
+D + S+MT RQ+A
Sbjct: 353 VDVISSTMTTRQLA 366
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 85.8 bits (203), Expect = 2e-16
Identities = 37/72 (51%), Positives = 61/72 (84%)
Frame = +2
Query: 2 SLNRSIKRLGSSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQLID 181
SLN +++R G +D+V+++DYVPN+MNVLNKVKE +P++++KAK+NKITLL+ +++LI+
Sbjct: 246 SLN-NLRRNGQADLVYANDYVPNSMNVLNKVKEHVPKDKFKAKNNKITLLKEYDKQKLIE 304
Query: 182 AVQSSMTERQIA 217
+ S+T RQ++
Sbjct: 305 IINKSLTARQLS 316
>UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20 -
Leucania separata nuclear polyhedrosis virus (LsNPV)
Length = 179
Score = 65.3 bits (152), Expect = 3e-10
Identities = 29/72 (40%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Frame = +2
Query: 2 SLNRSIKRLGSSD-----VVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTR 166
SL RSIKRL ++ +++ S+YVPN++N+LNK+KE LP++++ A+HNKI L+ + +
Sbjct: 106 SLKRSIKRLQRAEQHEPTIIYQSEYVPNSINILNKIKEQLPKDKFTARHNKIQLVDDCGK 165
Query: 167 EQLIDAVQSSMT 202
+ L+ + T
Sbjct: 166 DTLVKLLSELKT 177
>UniRef50_A0E1R2 Cluster: Chromosome undetermined scaffold_73, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_73,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 494
Score = 37.5 bits (83), Expect = 0.058
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +2
Query: 11 RSIKRLGSSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQLIDAVQ 190
+++K L S + Y+PN + V K+ +K + N + ++QNL E+ + +
Sbjct: 151 KNLKNLKSISSIIEKCYLPNMIRVCYKLINDDSNYDFKGRFNNVKVIQNLGEEETVQILY 210
Query: 191 SSMTERQIA 217
+ E+Q A
Sbjct: 211 MKVNEKQNA 219
>UniRef50_Q5UP83 Cluster: Putative KilA-N domain-containing protein
L4; n=1; Acanthamoeba polyphaga mimivirus|Rep: Putative
KilA-N domain-containing protein L4 - Mimivirus
Length = 454
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 2 SLNRSIKRLGSSDVVFSSDYVPNAMNVLNKVKETLPRNQYK--AKHNKITLLQNLTREQL 175
+L+R K +V+ + Y PN+M++ N+ K+ L + + K K +K L ++ T +QL
Sbjct: 379 ALSRYYKSHPKGNVILTIKYTPNSMHLWNECKDDLHKKKIKLSKKSSKFNLREDYTEKQL 438
Query: 176 IDAVQ 190
I ++
Sbjct: 439 IKDIK 443
>UniRef50_A7HZS8 Cluster: Cpp14; n=1; Campylobacter hominis ATCC
BAA-381|Rep: Cpp14 - Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
Length = 2117
Score = 33.9 bits (74), Expect = 0.71
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 8 NRSIK-RLGSSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQLIDA 184
N IK R ++V + + N N LN+ ETLP+N YK N+ + + +++IDA
Sbjct: 679 NLEIKIRSHGEELVCTKNSNLNLENELNRFVETLPKNIYKFHKNETKINDEIYLDEIIDA 738
>UniRef50_A0BGK0 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 302
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 65 PNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQLIDAVQSSMT 202
PN +++ ++K +P+NQ K + +I L+QNL +E I + T
Sbjct: 118 PNQQDIIQQIKMKIPQNQTKKQKEEI-LIQNLKQETQITEPEEYFT 162
>UniRef50_Q2AIN1 Cluster: Glycosyl transferase, group 1; n=1;
Halothermothrix orenii H 168|Rep: Glycosyl transferase,
group 1 - Halothermothrix orenii H 168
Length = 385
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 44 VFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQ 172
+FSSDY+PN + N V E L R K HN + + +EQ
Sbjct: 5 LFSSDYLPNIGGIANHVAE-LGRALVKLGHNVVVFTKCSFKEQ 46
>UniRef50_Q93ZM1 Cluster: At2g16400/F16F14.10; n=2; Arabidopsis
thaliana|Rep: At2g16400/F16F14.10 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 482
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 23 RLGSSDVVFSSDYVP-NAMNVLNKVKETLPRN 115
+ GSS++ ++VP NAMN N ET PR+
Sbjct: 6 KTGSSEIYSRPEFVPGNAMNYTNSFTETFPRD 37
>UniRef50_Q86LG6 Cluster: Pickpocket 19; n=3; Sophophora|Rep:
Pickpocket 19 - Drosophila melanogaster (Fruit fly)
Length = 511
Score = 30.7 bits (66), Expect = 6.6
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -3
Query: 238 VKIVIQSCNLTFRHARLHGIDELFSSQVLQQRDL---VVLGFVLVSRQRFFNFVKHVH 74
+K + CN +F H+ +HG+ +F Q L QR L +VLG V+ + + H H
Sbjct: 27 IKFREKLCN-SFAHSNIHGMQHVFGEQHLWQRCLWLAIVLGAVITGFS-LYTVLMHRH 82
>UniRef50_Q2GQP7 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 800
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 77 NVLNKVKETLPRNQYKAKHNKITLLQNLTREQLIDAVQSSMTE 205
N+ ++L RN A + I +L L++E L DAVQ S+TE
Sbjct: 442 NIFGPRIQSLLRNDI-ASYPAIKVLNRLSKEDLADAVQKSLTE 483
>UniRef50_UPI00006CFFC9 Cluster: hypothetical protein
TTHERM_00755800; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00755800 - Tetrahymena
thermophila SB210
Length = 337
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 8 NRSIKRLGSSDVVFSSDYVPNAMNVLNKVKETLPRNQYKAKHNKITLLQNLTREQLI 178
N + + G+S +V PN +N+ + + K +NKI + QNL ++ L+
Sbjct: 222 NNLLPQFGASQIVEEQKCKPNELNIQKYNPLQIRNSHQKQDNNKIEIKQNLAQKILL 278
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,674,819
Number of Sequences: 1657284
Number of extensions: 3800688
Number of successful extensions: 13464
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13453
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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