Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n17
         (270 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   1.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   1.8  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   2.4  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   2.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   2.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   4.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    19   9.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    19   9.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +3

Query: 93  LKKRCLE-TSTKPSTTRSRCCKT 158
           +K  C E T  +P     RCCKT
Sbjct: 85  IKNECPEPTCDEPVHRPGRCCKT 107


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 94  NFVKHVHGVGHIVAAKYHV 38
           N   H H  GH + A++HV
Sbjct: 318 NNQNHHHHAGHHIHAQHHV 336


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 107 PRNQYKAKHNKI 142
           P+ +YK K+NK+
Sbjct: 107 PKGEYKQKYNKL 118


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 109 SKPVQSQAQQDHAVAKLDSRTAHRCRAVEH 198
           SKP    A Q  AVA+ ++R  +R + V +
Sbjct: 41  SKPGGKTAPQPVAVARRNARERNRVKQVNN 70


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 97  FNFVKHVHGVGHIVAAKYHVGRTQAFNATV 8
           F+ +   HG  +    +YH+  T   +ATV
Sbjct: 141 FHLIYEAHGFSYKCGIQYHICNT-VISATV 169


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 97  FNFVKHVHGVGHIVAAKYHVGRTQAFNATV 8
           F+ +   HG  +    +YH+  T   +ATV
Sbjct: 137 FHLIYEAHGFSYKCGIQYHICNT-VISATV 165


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 261 WNKVFYYKLKLL 226
           WNK+F Y++ L+
Sbjct: 629 WNKLFGYQILLI 640


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 144 VILLCLALYWFR 109
           V+ LC A+Y++R
Sbjct: 112 VLTLCYAVYYWR 123


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 19.0 bits (37), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 263 FGIKYFITS*NCYSIVQSDV 204
           F + YFI +  C SI  ++V
Sbjct: 164 FDLVYFILAFACISIAYTNV 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,089
Number of Sequences: 336
Number of extensions: 989
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4485306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)