Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n17
         (270 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY597812-1|AAT09005.1|  238|Homo sapiens UHS KerB-like protein.        28   4.6  
AJ628246-1|CAF31638.1|  167|Homo sapiens keratin associated prot...    28   4.6  
AB126072-1|BAD20199.1|  238|Homo sapiens keratin associated prot...    28   4.6  
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ...    28   6.1  
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ...    28   6.1  
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ...    28   6.1  
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.          28   6.1  
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.          28   6.1  
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.          28   6.1  
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.          28   6.1  
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.           28   6.1  

>AY597812-1|AAT09005.1|  238|Homo sapiens UHS KerB-like protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 63  CPTP*TCLTKLKKRCLETST-KPSTTRSRCCKT*LENSS-SMPC 188
           C  P  C +     C ++S  KPS ++S CCK     SS   PC
Sbjct: 131 CYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPC 174


>AJ628246-1|CAF31638.1|  167|Homo sapiens keratin associated protein
           5-9 protein.
          Length = 167

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 63  CPTP*TCLTKLKKRCLETST-KPSTTRSRCCKT*LENSS-SMPC 188
           C  P  C +     C ++S  KPS ++S CCK     SS   PC
Sbjct: 60  CYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPC 103


>AB126072-1|BAD20199.1|  238|Homo sapiens keratin associated protein
           protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 63  CPTP*TCLTKLKKRCLETST-KPSTTRSRCCKT*LENSS-SMPC 188
           C  P  C +     C ++S  KPS ++S CCK     SS   PC
Sbjct: 131 CYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPC 174


>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
           precursor transcript variant 3 protein.
          Length = 2809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 800 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 848


>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
           precursor transcript variant 2 protein.
          Length = 2809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 800 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 848


>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
           precursor transcript variant 1 protein.
          Length = 2809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 800 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 848


>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
          Length = 2809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 800 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 848


>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
          Length = 2809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 800 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 848


>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
          Length = 2809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 800 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 848


>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
          Length = 2809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 800 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 848


>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
          Length = 2816

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 51  AATMC--PTP*TCLTKLKKRCLETSTKPSTTRSRCCKT*LENSSSMPCSR 194
           + T C   T  TC  K+++   E + + ++ RS CC T L  +   PC R
Sbjct: 807 SGTFCLDSTKGTCWLKIQESRCEVNLQGASLRSECCAT-LGAAWGSPCER 855


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,200,501
Number of Sequences: 237096
Number of extensions: 565188
Number of successful extensions: 1420
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 76,859,062
effective HSP length: 67
effective length of database: 60,973,630
effective search space used: 1341419860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)