Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n10
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   0.64 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.64 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   0.64 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.84 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   1.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    20   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   7.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 0.64
 Identities = 6/27 (22%), Positives = 18/27 (66%)
 Frame = -2

Query: 193 SFECWVL*HVLSRLVQQSLCYLELLTI 113
           S++C +  H+ + ++  ++C++ LL +
Sbjct: 151 SYKCGIQYHICNTVISATVCFMMLLML 177


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 0.64
 Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
 Frame = -2

Query: 331 FFFQYYLILFC*VFIQIGXXXXXXXXXCI----HFQIQFLHLP*LQYLFSSFECWVL*HV 164
           +F+  ++IL C  +              +    +F +    L  + Y + +F  + + H+
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTV-HL 160

Query: 163 LSRL-VQQSLCYLELLTIHPLLC*KFLVYS 77
           L  L +    C   + T+H L C  F+ ++
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLLFCCAFIFFN 190



 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 136 CYLELLTIHPLLC*KFLVYSF 74
           C   + T+H LLC  +  Y+F
Sbjct: 87  CPFIIFTVHFLLCTYYFYYAF 107



 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 331 FFFQYYLILFC*VFI 287
           ++F Y  +LFC  FI
Sbjct: 259 YYFYYMHLLFCCAFI 273


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 0.64
 Identities = 6/27 (22%), Positives = 18/27 (66%)
 Frame = -2

Query: 193 SFECWVL*HVLSRLVQQSLCYLELLTI 113
           S++C +  H+ + ++  ++C++ LL +
Sbjct: 147 SYKCGIQYHICNTVISATVCFMMLLML 173


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +1

Query: 34  TLRSSNTVNAPK----IKKNKPKTFNTIEDELSTIPGSKVTVAPDGT 162
           T+  SN  ++P     I+K   K+F++   + S+ PG   T AP G+
Sbjct: 716 TVPESNNGSSPSVLNAIEKLIEKSFDSRSRQNSSFPGHGPTTAPMGS 762


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 127 PGSKVTVAPDGTVHVI--KPNTQKRKINT 207
           PG++ T     ++++I   PNT K K+NT
Sbjct: 128 PGNQSTPGIKLSINIILSDPNTNKLKLNT 156


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 60  CSQNQKE*TKNFQH 101
           CS+ QKE TK   H
Sbjct: 73  CSEKQKEMTKKVIH 86


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 101 VLKVFGLFFLILGALTV 51
           V+ +  +FF++LGA  V
Sbjct: 62  VVTIITVFFVVLGAAVV 78


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 101 VLKVFGLFFLILGALTV 51
           V+ +  +FF++LGA  V
Sbjct: 62  VVTIITVFFVVLGAAVV 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.308    0.126    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,453
Number of Sequences: 336
Number of extensions: 1095
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (19.9 bits)