Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n10
         (332 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein prot...    29   2.6  

>AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein
           protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +1

Query: 70  IKKNKPKTFNTIEDELSTIPGSKVTV 147
           IK+ + +TF + ED +S +PGS++TV
Sbjct: 90  IKELRSRTFPSAEDVVSRVPGSQLTV 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.308    0.126    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,877,626
Number of Sequences: 237096
Number of extensions: 616179
Number of successful extensions: 1051
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)