Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n10
         (332 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    28   2.5  
AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p pro...    27   7.8  
AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-P...    27   7.8  
AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-P...    27   7.8  

>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +1

Query: 70   IKKNKPKTFNT--IEDELSTIPGSKVTVAPDGTVH-VIKPNTQKRK 198
            I KN P+ F T  +E + +T   ++V V PDGT H V+K  T+ R+
Sbjct: 8087 ILKNVPQAFETTFVEPDETT---TEVIVGPDGTKHIVLKKVTRTRQ 8129


>AY071265-1|AAL48887.1|  128|Drosophila melanogaster RE29988p
           protein.
          Length = 128

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 104 IVLKVFGLFFLILGALTVFD 45
           I L  FG+FFL LG L +FD
Sbjct: 12  IGLAGFGIFFLFLGMLLLFD 31


>AE014298-2349|AAN09388.1|  128|Drosophila melanogaster CG32576-PA,
           isoform A protein.
          Length = 128

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 104 IVLKVFGLFFLILGALTVFD 45
           I L  FG+FFL LG L +FD
Sbjct: 12  IGLAGFGIFFLFLGMLLLFD 31


>AE014298-2347|AAX52500.1|  140|Drosophila melanogaster CG32576-PB,
           isoform B protein.
          Length = 140

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 104 IVLKVFGLFFLILGALTVFD 45
           I L  FG+FFL LG L +FD
Sbjct: 12  IGLAGFGIFFLFLGMLLLFD 31


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.308    0.126    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,587,039
Number of Sequences: 53049
Number of extensions: 176713
Number of successful extensions: 516
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)