Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19n08
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 193 4e-48
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 182 9e-45
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 165 1e-39
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 95 2e-18
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 93 7e-18
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 89 9e-17
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 81 3e-14
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 80 5e-14
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 77 5e-13
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 71 2e-11
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 70 4e-11
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 62 1e-08
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 62 1e-08
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 56 1e-06
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 40 0.052
UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 193 bits (470), Expect = 4e-48
Identities = 91/142 (64%), Positives = 101/142 (71%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60
Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 414
TYGKPKSHGVNQLKP R LQSIAEE +SYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120
Query: 415 VAQDSSYKYFEVILVDPSHKVI 480
+AQD+SYKYFEVIL+D H I
Sbjct: 121 IAQDASYKYFEVILIDTHHSAI 142
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 182 bits (442), Expect = 9e-45
Identities = 87/142 (61%), Positives = 99/142 (69%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 414
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 415 VAQDSSYKYFEVILVDPSHKVI 480
V +DS+YK+FEVIL+DP HK I
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAI 142
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 165 bits (400), Expect = 1e-39
Identities = 73/142 (51%), Positives = 96/142 (67%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQ
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFV 60
Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 414
TYGKPK+HGVN+LK ++ Q++AE +SYW
Sbjct: 61 VYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYW 120
Query: 415 VAQDSSYKYFEVILVDPSHKVI 480
VA+DS+YK++EV+L+DP HK I
Sbjct: 121 VAEDSTYKFYEVVLIDPFHKAI 142
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 94.7 bits (225), Expect = 2e-18
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 225
MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNE 57
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 92.7 bits (220), Expect = 7e-18
Identities = 49/156 (31%), Positives = 81/156 (51%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
MG RY+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQ
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQGVV 60
Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 414
T +PK GV + + NLQ +AE+ SYW
Sbjct: 61 VVRVRVRRGPFNRRRPN--TGRRPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYW 118
Query: 415 VAQDSSYKYFEVILVDPSHKVIPVEIGFSQLFEKFY 522
V +D+ YK+FEV+++DPSH I + ++ + K Y
Sbjct: 119 VGEDAMYKWFEVVMIDPSHPAIRNDPDYAWVVGKEY 154
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 89.0 bits (211), Expect = 9e-17
Identities = 51/142 (35%), Positives = 71/142 (50%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
MG Y+YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQ
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYI 60
Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 414
KP G + P ++LQ IAEE +SYW
Sbjct: 61 IVRVRVRRGGRKRPRWKGGR--KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYW 118
Query: 415 VAQDSSYKYFEVILVDPSHKVI 480
V +D YK+FEVI+VDP H VI
Sbjct: 119 VGEDGMYKWFEVIMVDPHHPVI 140
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 80.6 bits (190), Expect = 3e-14
Identities = 45/146 (30%), Positives = 71/146 (48%)
Frame = +1
Query: 43 QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 222
Q+ G Y +++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 223 QXXXXXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXX 402
Q +PK GV P ++ + IAEE
Sbjct: 79 QGVVVVRVRVRKGGLNRPRPNKGR--RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVL 136
Query: 403 SSYWVAQDSSYKYFEVILVDPSHKVI 480
+SYWVA+D Y+++EVILVDP H I
Sbjct: 137 NSYWVAEDGEYEWYEVILVDPHHPAI 162
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 79.8 bits (188), Expect = 5e-14
Identities = 49/142 (34%), Positives = 71/142 (50%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
+ Y YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQ
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFV 60
Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 414
+PK GV P++ + IAEE SY+
Sbjct: 61 MVRVRVRRGGLNKPRPNSGR--RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYY 118
Query: 415 VAQDSSYKYFEVILVDPSHKVI 480
VA+D YKY+EVI+VD SH VI
Sbjct: 119 VAEDGMYKYYEVIMVDYSHPVI 140
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 76.6 bits (180), Expect = 5e-13
Identities = 47/139 (33%), Positives = 63/139 (45%)
Frame = +1
Query: 64 YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXX 243
Y +I+E + + L R +R+ + R RPTR DKAR LGY+AKQ
Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVR 65
Query: 244 XXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQ 423
+ K GVN++ +NLQ IAEE +SYWV +
Sbjct: 66 VSVRKGTARKSRFKAGR--RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGE 123
Query: 424 DSSYKYFEVILVDPSHKVI 480
D S K+FE IL+DP H I
Sbjct: 124 DGSQKWFEAILLDPEHGAI 142
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/134 (32%), Positives = 64/134 (47%)
Frame = +1
Query: 61 AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXX 240
AY Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQ
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQGVVVV 64
Query: 241 XXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVA 420
+PK GV + ++ + +AEE +SYWVA
Sbjct: 65 RVRLMRGPFNRRRPDSGR--RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVA 122
Query: 421 QDSSYKYFEVILVD 462
D Y+YFEVIL+D
Sbjct: 123 DDGIYRYFEVILID 136
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 55 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 225
MGAYR + EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQ
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQ 54
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/117 (30%), Positives = 55/117 (47%)
Frame = +1
Query: 121 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXXXXXXXXXXXXXXXXXATYG 300
LR RV +R+ + R +P+R +ARRLGY+AKQ
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQGVIVVRMRVGTGGMRKQRPTGGR-- 116
Query: 301 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSH 471
+PK GV ++K N++++AE SY++ +D + +FEVIL DP H
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDH 173
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/117 (32%), Positives = 55/117 (47%)
Frame = +1
Query: 121 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXXXXXXXXXXXXXXXXXATYG 300
+R RV +R+ + R RPTR D+AR LGY+AKQ
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQGIVVVRMRVGTGGMRRQRPRGGR-- 77
Query: 301 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSH 471
+PK GV ++K +++ +A SY+V +D +Y +FEVIL DPSH
Sbjct: 78 RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSH 134
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = -3
Query: 462 VHEDNLEILV*RILCNPVRAQHXXXXXXXXXTLLSNGLKVARGLQLVDTMALGLAISGTL 283
++EDNL+ + I NPV Q + LSN LK + +QLV+T+ LAIS TL
Sbjct: 46 INEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFLSNRLKASGKVQLVNTVVNRLAISCTL 105
Query: 282 SNWTLAATTSHTDSEYNITLFSTVA 208
W + TT+ T+ + TL S V+
Sbjct: 106 RKWAFSTTTADTNPVKDTTLLSLVS 130
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 39.9 bits (89), Expect = 0.052
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 301 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKVI 480
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H I
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
>UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 465
Score = 33.1 bits (72), Expect = 6.0
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 285 LSNWTLAATTSHTDSEYNITLFSTVA*SSGFVRPCGPGSAVHTSQLTVLPYPHTQQKTHN 106
LSN+T AAT ++T++ N VA ++ P S VH+ L+ PH T
Sbjct: 69 LSNYTFAATNNNTNNRNNTITAKGVAPANAANAPIAVSSKVHSPALSEHQNPHFTTNTPR 128
Query: 105 I 103
+
Sbjct: 129 V 129
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,743,071
Number of Sequences: 1657284
Number of extensions: 15276944
Number of successful extensions: 37035
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 35602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37017
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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