Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n06
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    66   9e-13
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   6.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.0  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 66.1 bits (154), Expect = 9e-13
 Identities = 31/77 (40%), Positives = 43/77 (55%)
 Frame = +2

Query: 347 IFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYLVVTAPISENVDKTK 526
           + V+G  E K+DDH   +  F   Y LP   + AD+ + L+SDG L +T P  E   + K
Sbjct: 38  VLVEGKHEEKQDDHGYVSRHFVRRYMLPKGHNEADIVSSLSSDGILTITCPRKE--IEQK 95

Query: 527 NTERVVPIVETGAPYKK 577
           N ER +PI  TG P K+
Sbjct: 96  NEERSIPITHTGQPMKQ 112


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +2

Query: 464 LTSDGYLVVTAPISENVDKTKNTERVVPIVETGAPYKKDE 583
           L + GYL++  P+SE     + T+ +  +   G    ++E
Sbjct: 533 LLTHGYLIMQVPVSEGCGPFRGTQYMYQLFMQGILKLREE 572


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 78   SLSPVSQR*RLCLPGTKKLSRSPSPLQMTSSRSHG*TF 191
            SLSP +   R   PG + L  +P  +   S R    TF
Sbjct: 1348 SLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATF 1385


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 78   SLSPVSQR*RLCLPGTKKLSRSPSPLQMTSSRSHG*TF 191
            SLSP +   R   PG + L  +P  +   S R    TF
Sbjct: 1345 SLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATF 1382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,479
Number of Sequences: 2352
Number of extensions: 9827
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)