Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n03
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p pro...    32   0.59 
BT022162-1|AAY51556.1|  395|Drosophila melanogaster IP01380p pro...    29   7.2  
AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-P...    29   7.2  
AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p pro...    28   9.6  
AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p pro...    28   9.6  
AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-P...    28   9.6  
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P...    28   9.6  

>BT015203-1|AAT94432.1|  841|Drosophila melanogaster RE65032p
           protein.
          Length = 841

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 421 NKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRP 522
           N+ Q  +C CR  A  +S+ +   QN W I LRP
Sbjct: 1   NRYQDVQCVCRLSAIDISSANRYFQNNWLISLRP 34


>BT022162-1|AAY51556.1|  395|Drosophila melanogaster IP01380p
           protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -3

Query: 356 VCKYCIMVLNWGTCLMNS--SRKNIEKMFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKV 183
           VC +CI   +     +N+   R+N    FF L  LS+ +     L  +  + ++ ++K  
Sbjct: 12  VCNHCIETFDHHCPWVNNCIGRRNYRFFFFFLVSLSIHMLSIFSLCLVYVLKIMPNIKDT 71

Query: 182 RPLPSTIKLWL 150
            P+ + I + L
Sbjct: 72  APIVAIILMGL 82


>AE014298-1329|AAF46491.3| 1367|Drosophila melanogaster CG32705-PA
           protein.
          Length = 1367

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -3

Query: 356 VCKYCIMVLNWGTCLMNS--SRKNIEKMFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKV 183
           VC +CI   +     +N+   R+N    FF L  LS+ +     L  +  + ++ ++K  
Sbjct: 130 VCNHCIETFDHHCPWVNNCIGRRNYRFFFFFLVSLSIHMLSIFSLCLVYVLKIMPNIKDT 189

Query: 182 RPLPSTIKLWL 150
            P+ + I + L
Sbjct: 190 APIVAIILMGL 200


>AY118671-1|AAM50531.1| 1240|Drosophila melanogaster AT03020p
           protein.
          Length = 1240

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 305 SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVS 439
           S SN  P      N C+   IR+R+  + R  V+ +S    FN S
Sbjct: 560 SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNES 604


>AY051517-1|AAK92941.1|  731|Drosophila melanogaster GH16956p
           protein.
          Length = 731

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 305 SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVS 439
           S SN  P      N C+   IR+R+  + R  V+ +S    FN S
Sbjct: 54  SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNES 98


>AE013599-2721|AAF57674.2|  731|Drosophila melanogaster CG30115-PC,
           isoform C protein.
          Length = 731

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 305 SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVS 439
           S SN  P      N C+   IR+R+  + R  V+ +S    FN S
Sbjct: 54  SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNES 98


>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
            isoform D protein.
          Length = 1593

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 305  SSSNKCPNLGPLCNTCKHITIRRRHPTWTRSCVSRASPQTKFNVS 439
            S SN  P      N C+   IR+R+  + R  V+ +S    FN S
Sbjct: 916  SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNES 960


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,741,298
Number of Sequences: 53049
Number of extensions: 616303
Number of successful extensions: 1962
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)