Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19n01
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.78 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   1.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   9.6  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 461 SSNTNVNFNAEKNFYVAITCIMVNVITGLCWMLFAAFQI 345
           +++T V    +K F+   T +  N++ GLC   F    +
Sbjct: 174 NNSTGVEHFFKKQFHYIFTYMPYNIVFGLCLTTFGLLPV 212


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = -3

Query: 416 VAITCIMVNVITGLCWMLF 360
           ++  C +++ I G CW+++
Sbjct: 44  ISAICFLLSTILGTCWIIY 62


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -3

Query: 395 VNVITGLCWMLFAAFQIYVFKNGHLPTLDVLYRHYDLESVC 273
           VN   G    LF   QIY+F    +P+  V    Y L  +C
Sbjct: 74  VNFQFGSILALFGVVQIYIFSGFIVPSGVVYKIGYWLHQIC 114


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -3

Query: 665 LLLAYLIVFVLSIMGVAD---NRYAFLLEIEGKRSVINLSIPIMLSFGMWILFYTFYFVW 495
           LL+ Y I+    +   A    N++   + +  ++ V+ +   ++LSF + ++ +  + +W
Sbjct: 253 LLILYCIIAKNLMSNAATLVLNKHIDNISLRARKQVVLMLGTVVLSFFLCLIPFRVFILW 312

Query: 494 KIVV 483
            I+V
Sbjct: 313 IILV 316


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 363 QHPTQPSDHVYHNTRD 410
           QH T PSD+ Y+ T D
Sbjct: 13  QHGTYPSDNYYNYTSD 28


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 363 QHPTQPSDHVYHNTRD 410
           QH T PSD+ Y+ T D
Sbjct: 13  QHGTYPSDNYYNYTSD 28


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 363 QHPTQPSDHVYHNTRD 410
           QH T PSD+ Y+ T D
Sbjct: 13  QHGTYPSDNYYNYTSD 28


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +1

Query: 517 NNIHMPNDSIIGIDRLITDRFPSISSKNAYLLS-ATPIIDNTNTIRYAN 660
           + +H  +  ++G+     DRF   S K   LL  A  +  N   I  AN
Sbjct: 279 SGVHSESQKLVGVCYEYQDRFSDESKKRRELLRLAQQVNANIAQITAAN 327


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 561 IDNRSLSFNFQQKRVSVV 614
           ID   +SFNF Q  V ++
Sbjct: 94  IDKTKISFNFSQGPVKIM 111


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 408 HVYYGKRDHWAVLDA 364
           H+Y  K+D W  L+A
Sbjct: 91  HLYKNKQDWWKQLEA 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,172
Number of Sequences: 336
Number of extensions: 4400
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)