Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19m24
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.75 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.00 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.3  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   5.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = -2

Query: 491 FNQMRNCQHRQIIRSTNISVHYSIVLSQRCCFYGTRFQNTSIIYKHIQLVIVINSFFYYI 312
           F  + NCQ+ ++      ++ YSI++ +   F   + +N S+  + I   +V  +   Y+
Sbjct: 285 FTILWNCQNTRVASEDFKAIWYSILIKKADSFCKKKLENYSL--QLINHRVVFTAMGLYV 342

Query: 311 LDI 303
           L++
Sbjct: 343 LNM 345


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +3

Query: 192 LTGRKKENLDNVASDCESRSPSKIKPLVVVADMNNESDVENIIKKTVDNYHQLD 353
           LT  +K     V  +   RS    +     +D   E+D E ++KK VD   +L+
Sbjct: 824 LTPERKMEPPGVPLNSTPRSTPDKREKSPTSDKAQEADGEVVVKKEVDEEERLE 877


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 23  PSGSFRGYKFV 55
           PS SFR YKFV
Sbjct: 260 PSPSFRWYKFV 270


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 541 KDLKPVTLETLTMFPLVLIKCGIAN 467
           K L+ V LETL M+P V I   + N
Sbjct: 46  KYLERVLLETLRMYPPVPIITRVIN 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,069
Number of Sequences: 336
Number of extensions: 3325
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)