Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19m22
(663 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10372 Cluster: Occlusion-derived virus envelope protei... 291 1e-77
UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep: ... 217 3e-55
UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:... 161 1e-38
UniRef50_Q6QXM7 Cluster: ORF87; n=8; Granulovirus|Rep: ORF87 - A... 93 4e-18
UniRef50_Q1A4L9 Cluster: ODV-E27; n=1; Choristoneura occidentali... 72 1e-11
UniRef50_UPI00006CAFD7 Cluster: hypothetical protein TTHERM_0046... 41 0.023
UniRef50_O28714 Cluster: Chromosome segregation protein; n=1; Ar... 38 0.16
UniRef50_A6WH01 Cluster: Putative uncharacterized protein precur... 35 1.5
UniRef50_Q23VB2 Cluster: Putative uncharacterized protein; n=2; ... 34 2.7
UniRef50_A2DC21 Cluster: Dynein heavy chain family protein; n=1;... 34 2.7
UniRef50_Q88X38 Cluster: Amino acid efflux protein; n=1; Lactoba... 33 4.6
UniRef50_Q4Q1F8 Cluster: Protein kinase, putative; n=2; Leishman... 33 4.6
UniRef50_Q81UJ8 Cluster: Hydrolase, haloacid dehalogenase-like f... 33 6.1
UniRef50_A6LV29 Cluster: Citrate transporter; n=1; Clostridium b... 33 6.1
UniRef50_Q7R2A9 Cluster: GLP_422_27424_30453; n=1; Giardia lambl... 33 6.1
UniRef50_Q17112 Cluster: 80 kDa protein; n=5; Babesia bovis|Rep:... 33 6.1
UniRef50_A2U1F5 Cluster: Cell surface protein; n=1; Polaribacter... 33 8.1
UniRef50_Q97W41 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_O10372 Cluster: Occlusion-derived virus envelope protein
E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E27 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 297
Score = 291 bits (714), Expect = 1e-77
Identities = 146/223 (65%), Positives = 180/223 (80%), Gaps = 8/223 (3%)
Frame = +2
Query: 17 MKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLST 196
MKRV+CNKVRTVTE+ ++ KI+KTY+L EFDLKNLSSLES+E K+KLALSKYMAM++T
Sbjct: 1 MKRVRCNKVRTVTEVKPNNAKIRKTYDLNEFDLKNLSSLESFENTKVKLALSKYMAMINT 60
Query: 197 LEMTQPLLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVTETNDTSIPG 376
LEMTQPLLE+FRN+ADTRQI AVV +T+ F+HNRF+PLVT+FTNKMEFV TET +T IPG
Sbjct: 61 LEMTQPLLEVFRNRADTRQIVAVVQATMGFVHNRFNPLVTHFTNKMEFVTTETAETIIPG 120
Query: 377 EPILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAXTFGASKRKNTTR 556
EPILFTEN+G LLC++DRPSIVKMLSREFD + N V +A T ++KRK +
Sbjct: 121 EPILFTENDGALLCAIDRPSIVKMLSREFDLSVAAEPQTSNREVLVAKTLVSNKRKRRSS 180
Query: 557 SDD-YESNKQP----DYD--MD-LSDFSITEVEATQYLTLLLI 661
+D+ YE K+P +Y+ MD LSDF++TE+E TQYL LLLI
Sbjct: 181 NDEGYEFIKRPRTFSEYNQCMDALSDFNVTEIETTQYLLLLLI 223
>UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep:
Orf13 - Trichoplusia ni SNPV
Length = 296
Score = 217 bits (529), Expect = 3e-55
Identities = 112/220 (50%), Positives = 156/220 (70%), Gaps = 5/220 (2%)
Frame = +2
Query: 17 MKRVKCN---KVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAM 187
MKR KC KVRTVTEI+NSD+K+QK Y+L EFD+KNL+SLESY+TLKIKL + KYMAM
Sbjct: 1 MKRFKCQSTPKVRTVTEIINSDDKLQKEYDLTEFDVKNLNSLESYDTLKIKLVIVKYMAM 60
Query: 188 LSTLEMTQPLLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVTETNDTS 367
L+TL++TQPLL IFR++ TR+I VV ++L F+HNR +PLV NF KMEF++ E+ + +
Sbjct: 61 LNTLQLTQPLLTIFRDRNATREIVTVVLASLGFVHNRVNPLVNNFNRKMEFIIVESKNLT 120
Query: 368 IPGEPILFTENEGV-LLCSVDRPSIVKMLSREFDTEALV-NFENDNCNVRIAXTFGASKR 541
IPGEPILF NE ++C +DR SIVKML ++FDT+ V N ++ +++ +F + K+
Sbjct: 121 IPGEPILFRHNENEDIVCIIDRVSIVKMLEKQFDTDMNVSNIIQEHQKLKLIKSFTSVKK 180
Query: 542 KNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLI 661
+ + DD +++ + E+EATQY TLL I
Sbjct: 181 RKS--FDDQDNSFY---------IKLNEIEATQYTTLLFI 209
>UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:
Odv-e27 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 284
Score = 161 bits (392), Expect = 1e-38
Identities = 92/218 (42%), Positives = 135/218 (61%), Gaps = 9/218 (4%)
Frame = +2
Query: 35 NKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQP 214
NKVRTVTEIVN +K+ K +EL E + KNL+SL SY+ ++ L+KY+AML LE +Q
Sbjct: 5 NKVRTVTEIVNGHDKLTKEFELDELNDKNLNSLVSYDNFNTRMVLAKYIAMLHMLETSQS 64
Query: 215 LLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVTETNDTSIPGEPILFT 394
L+ FR++ R+I +V ++LAF+H R +P+V +F N+ME+VVT + SIPGEP F
Sbjct: 65 LIATFRDRNAAREIVQIVHNSLAFVHQRANPMVNSF-NRMEYVVTNEINHSIPGEPFFFA 123
Query: 395 ------ENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNV---RIAXTFGASKRKN 547
+E + C +DRP+I K L ++ DT V+ E D + ++A F S K
Sbjct: 124 TTVSDDTDEETIRCYIDRPTIAKTLEKQIDTHVHVS-ELDATRIGQNKLANAFRGSAEKR 182
Query: 548 TTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLI 661
R+DDY YD + +D ++EV+ T+YLTLLL+
Sbjct: 183 -RRTDDYY------YDDNFADIKLSEVDVTRYLTLLLM 213
>UniRef50_Q6QXM7 Cluster: ORF87; n=8; Granulovirus|Rep: ORF87 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 298
Score = 93.5 bits (222), Expect = 4e-18
Identities = 62/219 (28%), Positives = 115/219 (52%), Gaps = 8/219 (3%)
Frame = +2
Query: 29 KCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMT 208
K RTVTEI +++ K Y++++ KN + E ++ L LSKY+AM+ L++
Sbjct: 14 KVENYRTVTEITDAENSYSKRYDVSDLVNKNEAYQRQQEKREMYLMLSKYVAMVLDLKLP 73
Query: 209 QPLLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVTETNDTSIPGEPIL 388
L +F + I ++V+ +LAF++ + P T F + M F++T +IPGEPI+
Sbjct: 74 D-LKILFGSNGTPEAILSLVYHSLAFVNTQMFPHSTRFVD-MRFIITSERKFAIPGEPIV 131
Query: 389 F-----TENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAXTFGASK-RKNT 550
F +++ ++C VDRP I+++L + D + END N + F K ++
Sbjct: 132 FYRSINPDDDQTVVCFVDRPGILRVLEKPVDVNVVFE-ENDCKNEYMTKLFDRIKSTEHA 190
Query: 551 TRSDDYESNKQPDY--DMDLSDFSITEVEATQYLTLLLI 661
+ YE ++ +++ S+ + E TQ++ LL++
Sbjct: 191 APVNPYERFITNEFVCNLNESNLKMDEGYITQFVILLIL 229
>UniRef50_Q1A4L9 Cluster: ODV-E27; n=1; Choristoneura occidentalis
granulovirus|Rep: ODV-E27 - Choristoneura occidentalis
granulovirus
Length = 284
Score = 71.7 bits (168), Expect = 1e-11
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Frame = +2
Query: 29 KCNKVRTVTEIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMT 208
K + RTVTEIV+S+ +K +++ + + KN + L+ + ++ L ++KY + E+
Sbjct: 10 KVDSYRTVTEIVDSENFYKKEFDVTDLEYKNEAYLQKNKKRQLFLMVAKYFVEV-VKELN 68
Query: 209 QPLLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVTETNDTSIPGEPIL 388
P + + + +T +I V+ +LAFI+N+ P F + F +T+ ++ +PIL
Sbjct: 69 IPDIRVLFDSNETDKIFTFVYYSLAFINNQMLPHNKQFIDIKFFRITD-RKMAVATDPIL 127
Query: 389 FTEN----EGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAXTFGASKRKNTTR 556
F ++ + + C VD +I ++LS+ D + FE D+ + K+
Sbjct: 128 FYKSLDSEDQTITCYVDTVNIHRILSKFVDVD--TKFEPDDDKKEVFKLIDRIKKVEQRN 185
Query: 557 SDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLI 661
D Y NK D + ++ E T ++TLL+I
Sbjct: 186 LDLYCFNKIMLVDNQPTP-TMDETYVTPFVTLLII 219
>UniRef50_UPI00006CAFD7 Cluster: hypothetical protein TTHERM_00469180;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00469180 - Tetrahymena thermophila SB210
Length = 3050
Score = 41.1 bits (92), Expect = 0.023
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Frame = +2
Query: 221 EIFRNKADTRQIAAVVFSTLAFIHNRFHP----LVTNFTNKMEFVVTETNDTSIPGEPIL 388
+I + + + I + F T F+ ++ +VT+ +M + ++++ + I G I
Sbjct: 1316 DIQKTQVQMQTIEDIFFLTQDFLLISYYSGQIIVVTSDLKQMSNINSQSHKSQIQGVKIS 1375
Query: 389 FTENE-GVLLCSVDRPSIVKMLSREFDTEALVNFENDN 499
++NE ++L S DR I+ EFD +AL N +N+N
Sbjct: 1376 ISQNEKSIILFSFDRVGIISKFILEFDGQALANKQNEN 1413
>UniRef50_O28714 Cluster: Chromosome segregation protein; n=1;
Archaeoglobus fulgidus|Rep: Chromosome segregation
protein - Archaeoglobus fulgidus
Length = 1156
Score = 38.3 bits (85), Expect = 0.16
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +2
Query: 20 KRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLK-NLSSLESYETLKIKLALSKYMAMLST 196
K+ K +V E + S +K+ + + FD++ +S +E E K +L L+K A LST
Sbjct: 436 KKAKQEEVWKQEEELMSAKKMLSSADKKLFDIRAKISDVED-ELKKAELELAKVKATLST 494
Query: 197 LEMTQPLLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFT----NKMEFVVTETNDT 364
L +EI + + R++ +F T+A + V N ++FVV ET D
Sbjct: 495 LRTYSKPVEILLDARNRRELPG-IFGTVAQLGEVDEEYVAAIEAAAGNALQFVVVETEDD 553
Query: 365 SI 370
++
Sbjct: 554 AV 555
>UniRef50_A6WH01 Cluster: Putative uncharacterized protein
precursor; n=1; Kineococcus radiotolerans SRS30216|Rep:
Putative uncharacterized protein precursor - Kineococcus
radiotolerans SRS30216
Length = 1028
Score = 35.1 bits (77), Expect = 1.5
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 56 EIVNSDEKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLST--LEMTQPLLEIF 229
E+++ +++ K + S S+E + AL++Y A+L+ LE+ + F
Sbjct: 326 EVLSRNQRAVKNLNDQYMQREGEISTGSHELDTVAAALTEYQALLAKDKLEVELQTITFF 385
Query: 230 RNKADTRQIAAVVFSTLAFIHNRF-HPL 310
A TR+ A + +TLA +N F HPL
Sbjct: 386 ATSAATREQALINGATLARFYNAFGHPL 413
>UniRef50_Q23VB2 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 409
Score = 34.3 bits (75), Expect = 2.7
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Frame = +2
Query: 74 EKIQKTYELAEFDLKNLSSLESYETLKIKL-ALSK-YMAM---LST--LEMTQPLLEIFR 232
EKIQ+ Y L NL +ES+ET + L A+++ Y+ +ST LE + L + +
Sbjct: 21 EKIQRKYYLYSNSDSNLKYIESWETQNVDLDAINRQYLKKKIDISTLFLEFNKYLNSLIQ 80
Query: 233 NKADTRQIAAVVFSTLAFIHNRFHPLV--TNFTNKMEFVVTETNDTSIPG 376
N +Q+ V L I + P + TN + E + ++ I G
Sbjct: 81 NMCSLKQVLKVFMDKLIIIQKGYQPHMEETNSQSIEELQSQQAEESDIEG 130
>UniRef50_A2DC21 Cluster: Dynein heavy chain family protein; n=1;
Trichomonas vaginalis G3|Rep: Dynein heavy chain family
protein - Trichomonas vaginalis G3
Length = 4271
Score = 34.3 bits (75), Expect = 2.7
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +2
Query: 167 LSKYMAMLSTLEMTQPLLEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVV 346
LS + +S LE T+PL + + QI + L NR + N TN+ + +V
Sbjct: 3109 LSANIRYVSILESTEPLRQKVESLDKEAQILEQKYKELETTTNRLETRLNNLTNEYKNLV 3168
Query: 347 TETNDTSIPGEPI 385
+E T I E I
Sbjct: 3169 SECEKTRIEAEQI 3181
>UniRef50_Q88X38 Cluster: Amino acid efflux protein; n=1;
Lactobacillus plantarum|Rep: Amino acid efflux protein -
Lactobacillus plantarum
Length = 202
Score = 33.5 bits (73), Expect = 4.6
Identities = 26/84 (30%), Positives = 34/84 (40%)
Frame = -1
Query: 306 GWNLLCIKANVLNTTAAICRVSALFLNISNSGWVISRVLSIAMYLLSANLIFRVS*LSKL 127
GWNLL KA + T A A L + W+ + L LL+A FRVS + L
Sbjct: 85 GWNLLRKKATAMGTLDADFSYKAAILTAFSVAWLNPQALIDGSVLLAA---FRVSIPAAL 141
Query: 126 LRFFKSNSANS*VFWIFSSLFTIS 55
FF + + W IS
Sbjct: 142 THFFMLGVILASIIWFIGLTSLIS 165
>UniRef50_Q4Q1F8 Cluster: Protein kinase, putative; n=2;
Leishmania|Rep: Protein kinase, putative - Leishmania
major
Length = 3459
Score = 33.5 bits (73), Expect = 4.6
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Frame = +2
Query: 359 DTSIPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAXTFGASK 538
+ P EP L ++ GV + + DR + E V+FE + + + G S+
Sbjct: 2122 EDKFPDEPHLDLKDVGVSVIASDRALEPYSTAEGVRMEGFVDFEVSSLDSSVTVVPGMSE 2181
Query: 539 RK--------NTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTL 652
+ N+ SDD+ES +P + S S VEA Q + +
Sbjct: 2182 GRRRPPGQPPNSGSSDDFESRLEPSWSARRSPVSKVSVEAEQQVMI 2227
>UniRef50_Q81UJ8 Cluster: Hydrolase, haloacid dehalogenase-like
family; n=13; Bacillus cereus group|Rep: Hydrolase,
haloacid dehalogenase-like family - Bacillus anthracis
Length = 290
Score = 33.1 bits (72), Expect = 6.1
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 251 QIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVTETNDTSIPGEPILFTENEGVLLCSVDR 430
+IA + T+ F+ R VT FT++ F ++ + IL T + ++D+
Sbjct: 20 KIAKGLRETIEFV-KRKDVYVTLFTSR-NFQSAHKVAKALKLDSILVTHGGAFISATLDK 77
Query: 431 PSIVKMLSREFDTEALVNFENDNCNVRIA-XTFGASKRKNTT 553
P + + LS E + E+ +CNVRI+ F R+ T
Sbjct: 78 PYVQRRLSEEKTFNIVQVLEHFDCNVRISHERFSIGNRERNT 119
>UniRef50_A6LV29 Cluster: Citrate transporter; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Citrate transporter -
Clostridium beijerinckii NCIMB 8052
Length = 464
Score = 33.1 bits (72), Expect = 6.1
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 435 DGLSTEHNSTPSFSVNK-MGSPGM-LVSLVSVTTNSILLVKLVTSGWNL 295
+G T H + P F N+ + S GM L+ LVSV +++L K+V WN+
Sbjct: 209 EGYGTGHKNEPEFDENEALPSFGMSLLPLVSVLIVTLVLQKVVFPNWNI 257
>UniRef50_Q7R2A9 Cluster: GLP_422_27424_30453; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_422_27424_30453 - Giardia lamblia
ATCC 50803
Length = 1009
Score = 33.1 bits (72), Expect = 6.1
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +2
Query: 110 DLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK--ADTRQIAAVVFSTLA 283
+L N+S++ S ETL + + LL IFRNK A+ Q + L
Sbjct: 160 ELVNISAI-SLETLDQACKTASETRKVHGDRSILELLLIFRNKKEANACQRCGCLRKQLI 218
Query: 284 FIHNRFHPLVTNFTNKMEFVVTETNDTS 367
++ ++FH L +NF+N + + +N++S
Sbjct: 219 YLSSQFHRLYSNFSNPSKGAQSRSNNSS 246
>UniRef50_Q17112 Cluster: 80 kDa protein; n=5; Babesia bovis|Rep: 80
kDa protein - Babesia bovis
Length = 607
Score = 33.1 bits (72), Expect = 6.1
Identities = 20/94 (21%), Positives = 45/94 (47%)
Frame = +2
Query: 344 VTETNDTSIPGEPILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRIAXT 523
VT+ +IP +P++ E V + +++ E + E ++N E +N + +
Sbjct: 249 VTQPAIPTIPEQPVVEPTEEPVEETAEGPADVIETAPEECEEEIVINPEEENKPDSSSSS 308
Query: 524 FGASKRKNTTRSDDYESNKQPDYDMDLSDFSITE 625
+S +++ SD E +K+P + +++ I E
Sbjct: 309 SSSSSSSSSSDSDSDEDDKEPIVEEPVAEEPIVE 342
>UniRef50_A2U1F5 Cluster: Cell surface protein; n=1; Polaribacter
dokdonensis MED152|Rep: Cell surface protein -
Polaribacter dokdonensis MED152
Length = 1898
Score = 32.7 bits (71), Expect = 8.1
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Frame = +2
Query: 173 KYMAMLSTLEMTQPL-LEIFRNKADTRQIAAVVFSTLAFIHNRFHPLVTNFTNKMEFVVT 349
+ M LS E T + EIF + A I A +TL F F P+ T +++ V++
Sbjct: 1740 RVMVDLSEDEQTYYVPFEIFASSASENTITADDLTTLTFT---FLPVEAQ-TKELDLVIS 1795
Query: 350 ETNDTSIPGEP-----ILFTENEGVLLCSVDRPSIVKMLSREFDTEALVNFENDNCNVRI 514
+ T + E I ENE + + + ++ ML E DTEA V + N
Sbjct: 1796 DVRFTKVAVESETVNKIEKFENEFMAYPNPSKGNVNVMLFSEHDTEATVTLTDINGKTIY 1855
Query: 515 AXTFGASKRKNTTRSDDYESNKQP 586
T + KN DY N +P
Sbjct: 1856 RGTANLTVGKNEL---DYNFNVKP 1876
>UniRef50_Q97W41 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus solfataricus|Rep: Putative uncharacterized
protein - Sulfolobus solfataricus
Length = 397
Score = 32.7 bits (71), Expect = 8.1
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = -1
Query: 369 MLVSLVSVTTNSILLVKLVTSGWNLLCIKANVLNTTAAICRVSALFLNISNSGWVISRVL 190
+L L++ + ILL+ L S N+ I +L+ I SALF+N++N ++ VL
Sbjct: 287 LLAVLLTAALSVILLLALGGSMRNMQVINFLILSF-GLIASFSALFINVANLQSPLNLVL 345
Query: 189 SIAMYLLSANLIFRVS 142
I LS +L++ VS
Sbjct: 346 LIPYEQLSLSLLYFVS 361
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,745,830
Number of Sequences: 1657284
Number of extensions: 11518348
Number of successful extensions: 34600
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 33320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34578
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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