Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19m17
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli... 45 3e-04
AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein. 45 3e-04
AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein p... 45 3e-04
D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein. 44 4e-04
BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein. 44 4e-04
AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein. 44 4e-04
AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein. 44 4e-04
BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein FL... 42 0.003
BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein. 42 0.003
AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens ... 42 0.003
AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens ... 42 0.003
AF458590-1|AAM49718.1| 340|Homo sapiens hypothetical protein pr... 42 0.003
BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repea... 32 2.2
BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repea... 32 2.2
BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein. 32 2.2
BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein. 32 2.2
AK025958-1|BAB15296.1| 157|Homo sapiens protein ( Homo sapiens ... 32 2.2
AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens ... 32 2.2
BC035230-1|AAH35230.2| 409|Homo sapiens zinc finger, DHHC-type ... 31 5.2
BC031265-1|AAH31265.1| 305|Homo sapiens tetraspanin 12 protein. 30 6.8
AY358703-1|AAQ89066.1| 305|Homo sapiens NET-2 protein. 30 6.8
AF124522-1|AAD17317.1| 305|Homo sapiens tetraspan NET-2 protein. 30 6.8
AC004456-1|AAQ96879.1| 305|Homo sapiens unknown protein. 30 6.8
>BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli)
protein.
Length = 329
Score = 44.8 bits (101), Expect = 3e-04
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Frame = +1
Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 438
R R KLL++DK+F + + V +DLC PG ++ L + G + + V V
Sbjct: 22 RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQV------LSQKIGGQGSGHVVAVD 75
Query: 439 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNAC--DLVLADGSVDVNGRENEQE 612
+ I GD+ + EI I+ C DLV+ DG+ DV G + E
Sbjct: 76 LQAMAPLPGVVQI-----QGDITQLSTAKEI-IQHFKGCPADLVVCDGAPDVTGLHDVDE 129
Query: 613 RLNFDLIMCETQLILICLRPGG 678
+ L++ + L+PGG
Sbjct: 130 YMQAQLLLAALNIATHVLKPGG 151
>AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein.
Length = 329
Score = 44.8 bits (101), Expect = 3e-04
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Frame = +1
Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 438
R R KLL++DK+F + + V +DLC PG ++ L + G + + V V
Sbjct: 22 RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQV------LSQKIGGQGSGHVVAVD 75
Query: 439 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNAC--DLVLADGSVDVNGRENEQE 612
+ I GD+ + EI I+ C DLV+ DG+ DV G + E
Sbjct: 76 LQAMAPLPGVVQI-----QGDITQLSTAKEI-IQHFKGCPADLVVCDGAPDVTGLHDVDE 129
Query: 613 RLNFDLIMCETQLILICLRPGG 678
+ L++ + L+PGG
Sbjct: 130 YMQAQLLLAALNIATHVLKPGG 151
>AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein
protein.
Length = 327
Score = 44.8 bits (101), Expect = 3e-04
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Frame = +1
Query: 259 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 438
R R KLL++DK+F + + V +DLC PG ++ L + G + + V V
Sbjct: 22 RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQV------LSQKIGGQGSGHVVAVD 75
Query: 439 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNAC--DLVLADGSVDVNGRENEQE 612
+ I GD+ + EI I+ C DLV+ DG+ DV G + E
Sbjct: 76 LQAMAPLPGVVQI-----QGDITQLSTAKEI-IQHFKGCPADLVVCDGAPDVTGLHDVDE 129
Query: 613 RLNFDLIMCETQLILICLRPGG 678
+ L++ + L+PGG
Sbjct: 130 YMQAQLLLAALNIATHVLKPGG 151
>D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein.
Length = 882
Score = 44.4 bits (100), Expect = 4e-04
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Frame = +1
Query: 328 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 492
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 320 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 379
Query: 493 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 657
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 380 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 439
Query: 658 ICLRPGGNCV 687
+R GG+ +
Sbjct: 440 SIVRTGGHFI 449
>BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 44.4 bits (100), Expect = 4e-04
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Frame = +1
Query: 328 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 492
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 273 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 332
Query: 493 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 657
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 333 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 392
Query: 658 ICLRPGGNCV 687
+R GG+ +
Sbjct: 393 SIVRTGGHFI 402
>AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 44.4 bits (100), Expect = 4e-04
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Frame = +1
Query: 328 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 492
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 273 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 332
Query: 493 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 657
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 333 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 392
Query: 658 ICLRPGGNCV 687
+R GG+ +
Sbjct: 393 SIVRTGGHFI 402
>AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein.
Length = 372
Score = 44.4 bits (100), Expect = 4e-04
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Frame = +1
Query: 328 FLDLCGGPGEFANYTMSLNPL-CKAYGVTLTN-NSVCVYKPTVCKRKNFTTITGP---DK 492
F D+C GPG F+ Y + K +G+TL N + + F G D
Sbjct: 217 FADVCAGPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDG 276
Query: 493 SGDVF-DKNVV----FEISIKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLIL 657
GD+ +N+ F + ++ADG V G+EN QE L+ L++C+ + L
Sbjct: 277 DGDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMAL 336
Query: 658 ICLRPGGNCV 687
+R GG+ +
Sbjct: 337 SIVRTGGHFI 346
>BC035005-1|AAH35005.1| 770|Homo sapiens hypothetical protein
FLJ11171 protein.
Length = 770
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 481 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 655 LICLRPGGNCVL 690
L L GG+ VL
Sbjct: 263 LTTLGNGGSFVL 274
>BC034468-1|AAH34468.1| 770|Homo sapiens FLJ11171 protein protein.
Length = 770
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 481 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 655 LICLRPGGNCVL 690
L L GG+ VL
Sbjct: 263 LTTLGNGGSFVL 274
>AK023183-1|BAB14452.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ13121 fis, clone NT2RP3002687. ).
Length = 586
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 481 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 19 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 78
Query: 655 LICLRPGGNCVL 690
L L GG+ VL
Sbjct: 79 LTTLGNGGSFVL 90
>AK002033-1|BAA92047.1| 770|Homo sapiens protein ( Homo sapiens
cDNA FLJ11171 fis, clone PLACE1007317, weakly similar to
Drosophila melanogaster Adrift mRNA. ).
Length = 770
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 481 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNFISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 655 LICLRPGGNCVL 690
L L GG+ VL
Sbjct: 263 LTTLGNGGSFVL 274
>AF458590-1|AAM49718.1| 340|Homo sapiens hypothetical protein
protein.
Length = 340
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 481 GPDKSGDVFDKNVVFEIS--IKCGNACDLVLADGSVDVNGRENEQERLNFDLIMCETQLI 654
GPD +GD+ + + I LV ADGS D G EQE L L CE
Sbjct: 203 GPDNTGDIMTLKFLTGLQNIISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTA 262
Query: 655 LICLRPGGNCVL 690
L L GG+ VL
Sbjct: 263 LTTLGNGGSFVL 274
Score = 29.9 bits (64), Expect = 9.0
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -1
Query: 653 ISCVSHMIKSKLRRSCSFSRPLTSTEP--SANTKSHALPHLMLISNTTFLSNTSPDLSGP 480
I+ ++H +KS R C +S + P AN + LI+NT + PD +G
Sbjct: 151 IASLNHYLKSH-RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWHLGPDNTGD 209
Query: 479 VMVVKFL 459
+M +KFL
Sbjct: 210 IMTLKFL 216
>BC112107-1|AAI12108.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 220 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 333
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 364 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 401
>BC105128-1|AAI05129.1| 501|Homo sapiens tetratricopeptide repeat
domain 19 protein.
Length = 501
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 220 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 333
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 364 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 401
>BC073796-1|AAH73796.1| 384|Homo sapiens TTC19 protein protein.
Length = 384
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 220 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 333
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 247 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 284
>BC011698-1|AAH11698.2| 382|Homo sapiens TTC19 protein protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 220 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 333
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 245 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 282
>AK025958-1|BAB15296.1| 157|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22305 fis, clone HRC04991. ).
Length = 157
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 220 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 333
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 20 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 57
>AK000350-1|BAA91103.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ20343 fis, clone HEP13649. ).
Length = 273
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 220 CARSKLFDKRPTRRPRCWRKLLEIDKKFHVCRHVDTFL 333
CAR LF K+P++ R + K L+I ++ RH T +
Sbjct: 136 CARYLLFSKQPSQAQRMYEKALQISEEIQGERHPQTIV 173
>BC035230-1|AAH35230.2| 409|Homo sapiens zinc finger, DHHC-type
containing 23 protein.
Length = 409
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 307 VCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 438
+CR F L PG +ANY+ +L+ C Y V +T ++
Sbjct: 326 ICRDRSVFTALFYCPGVYANYSSALSFTCVWYSVIITAGMAYIF 369
>BC031265-1|AAH31265.1| 305|Homo sapiens tetraspanin 12 protein.
Length = 305
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 34 TIKRPMLILPMYFCSLFVLFC 96
T+KR +L+L YF SL V+FC
Sbjct: 85 TVKRNLLLLAWYFGSLLVIFC 105
>AY358703-1|AAQ89066.1| 305|Homo sapiens NET-2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 34 TIKRPMLILPMYFCSLFVLFC 96
T+KR +L+L YF SL V+FC
Sbjct: 85 TVKRNLLLLAWYFGSLLVIFC 105
>AF124522-1|AAD17317.1| 305|Homo sapiens tetraspan NET-2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 34 TIKRPMLILPMYFCSLFVLFC 96
T+KR +L+L YF SL V+FC
Sbjct: 85 TVKRNLLLLAWYFGSLLVIFC 105
>AC004456-1|AAQ96879.1| 305|Homo sapiens unknown protein.
Length = 305
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 34 TIKRPMLILPMYFCSLFVLFC 96
T+KR +L+L YF SL V+FC
Sbjct: 85 TVKRNLLLLAWYFGSLLVIFC 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,338,836
Number of Sequences: 237096
Number of extensions: 1878640
Number of successful extensions: 4135
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4135
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -