Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19m15
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.6  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 391 CSFPEIAGYNFQQKEKVLFIC**TSQGYLYRALT 492
           C   +  G   +Q+E++  +C   + GY Y ALT
Sbjct: 171 CDSKKKKGPTPRQQEELCLVCGDRASGYHYNALT 204


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -1

Query: 491  VSALYRYPCDVH*QMNKTFSF-CWKLYPAISGKL 393
            V+ LY YP DV+   N  FS   W    A  GK+
Sbjct: 2526 VAPLYYYPGDVYDYFNANFSLNYWIEKGADPGKI 2559


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 241 RFSMCFVRFPTLSSIGY*C 297
           RF+   +R P L SIG  C
Sbjct: 360 RFAKLLLRLPALRSIGLKC 378


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 116 TKRGNILKIVREHYLRDDLL 175
           TK G + ++V   YL+ DL+
Sbjct: 189 TKLGELAQVVELEYLKTDLI 208


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 634 KLSIIFIIRHQYYLWEFS 581
           KL   + IRH++ LW F+
Sbjct: 406 KLPPNYEIRHKFKLWNFN 423


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 176 CGSAACNTCPHKDDELVLETSPDSPCAL 259
           CGS      P +DD   L  S  SP AL
Sbjct: 660 CGSMGDAHTPPEDDAESLNQSISSPGAL 687


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 176 CGSAACNTCPHKDDELVLETSPDSPCAL 259
           CGS      P +DD   L  S  SP AL
Sbjct: 552 CGSMGDAHTPPEDDAESLNQSISSPGAL 579


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 412 GYNFQQKEKVLFIC**TSQGYLYRAL 489
           G N  +  ++ F C   + GYLY  L
Sbjct: 97  GLNVIEANRLFFYCSGLASGYLYLKL 122


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 412 GYNFQQKEKVLFIC**TSQGYLYRAL 489
           G N  +  ++ F C   + GYLY  L
Sbjct: 97  GLNVIEANRLFFYCSGLASGYLYLKL 122


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 412 GYNFQQKEKVLFIC**TSQGYLYRAL 489
           G N  +  ++ F C   + GYLY  L
Sbjct: 97  GLNVIEANRLFFYCSGLASGYLYLKL 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,788
Number of Sequences: 336
Number of extensions: 3700
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)