Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19m15
(635 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052150-1|AAK93574.1| 982|Drosophila melanogaster SD10981p pro... 210 2e-54
AJ276897-1|CAC35051.1| 983|Drosophila melanogaster putative exo... 210 2e-54
AE014297-3526|AAF56281.1| 982|Drosophila melanogaster CG6413-PA... 210 2e-54
AY061288-1|AAL28836.1| 535|Drosophila melanogaster LD20423p pro... 30 2.3
AE014134-525|AAN10404.1| 443|Drosophila melanogaster CG9641-PB,... 30 2.3
AE014134-524|AAF51173.1| 535|Drosophila melanogaster CG9641-PA,... 30 2.3
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 30 3.0
AY051633-1|AAK93057.1| 279|Drosophila melanogaster GH28353p pro... 29 4.0
AE014298-2660|AAF48796.2| 279|Drosophila melanogaster CG7206-PA... 29 4.0
AE014298-2659|AAS65397.1| 404|Drosophila melanogaster CG7206-PB... 29 4.0
AY058276-1|AAL13505.1| 399|Drosophila melanogaster GH02863p pro... 29 5.3
AE013599-207|AAM70815.1| 440|Drosophila melanogaster CG3270-PA ... 29 5.3
>AY052150-1|AAK93574.1| 982|Drosophila melanogaster SD10981p
protein.
Length = 982
Score = 210 bits (512), Expect = 2e-54
Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 7/188 (3%)
Frame = +2
Query: 86 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPDSPCALFD 265
M T + F KTKRGNILKIVREHYLRDD+ CGS C C +++ L + + LF
Sbjct: 1 MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCREC-FQNEVYQLTSQHANKSTLFK 59
Query: 266 FPHYLVLDTNVVLHQIDVLEEDALTNVIILQTVLEEVKHQNTAVFQRLLDIISNKKRKFY 445
FPHYLVLDTNVVL QIDVLEED L NV++L TVL EVKH+++A+++R +I+ ++ R FY
Sbjct: 60 FPHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFY 119
Query: 446 SFVNEHHKDTYIERSPGEKQNDRNDRSIRKATSWYEYHLSINSLDGKF-------PKIIL 604
FVNEHHK+TY +R P E NDRNDR+IR AT WY+ HL + +F +++L
Sbjct: 120 VFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRVVL 179
Query: 605 VTDDENNR 628
+TDD NR
Sbjct: 180 LTDDAANR 187
>AJ276897-1|CAC35051.1| 983|Drosophila melanogaster putative
exoribonuclease DIS3 protein.
Length = 983
Score = 210 bits (512), Expect = 2e-54
Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 7/188 (3%)
Frame = +2
Query: 86 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPDSPCALFD 265
M T + F KTKRGNILKIVREHYLRDD+ CGS C C +++ L + + LF
Sbjct: 1 MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCREC-FQNEVYQLTSQHANKSTLFK 59
Query: 266 FPHYLVLDTNVVLHQIDVLEEDALTNVIILQTVLEEVKHQNTAVFQRLLDIISNKKRKFY 445
FPHYLVLDTNVVL QIDVLEED L NV++L TVL EVKH+++A+++R +I+ ++ R FY
Sbjct: 60 FPHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFY 119
Query: 446 SFVNEHHKDTYIERSPGEKQNDRNDRSIRKATSWYEYHLSINSLDGKF-------PKIIL 604
FVNEHHK+TY +R P E NDRNDR+IR AT WY+ HL + +F +++L
Sbjct: 120 VFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRVVL 179
Query: 605 VTDDENNR 628
+TDD NR
Sbjct: 180 LTDDAANR 187
>AE014297-3526|AAF56281.1| 982|Drosophila melanogaster CG6413-PA
protein.
Length = 982
Score = 210 bits (512), Expect = 2e-54
Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 7/188 (3%)
Frame = +2
Query: 86 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPDSPCALFD 265
M T + F KTKRGNILKIVREHYLRDD+ CGS C C +++ L + + LF
Sbjct: 1 MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCREC-FQNEVYQLTSQHANKSTLFK 59
Query: 266 FPHYLVLDTNVVLHQIDVLEEDALTNVIILQTVLEEVKHQNTAVFQRLLDIISNKKRKFY 445
FPHYLVLDTNVVL QIDVLEED L NV++L TVL EVKH+++A+++R +I+ ++ R FY
Sbjct: 60 FPHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFY 119
Query: 446 SFVNEHHKDTYIERSPGEKQNDRNDRSIRKATSWYEYHLSINSLDGKF-------PKIIL 604
FVNEHHK+TY +R P E NDRNDR+IR AT WY+ HL + +F +++L
Sbjct: 120 VFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRVVL 179
Query: 605 VTDDENNR 628
+TDD NR
Sbjct: 180 LTDDAANR 187
>AY061288-1|AAL28836.1| 535|Drosophila melanogaster LD20423p
protein.
Length = 535
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 302 LHQIDVLEEDALTNVIILQ-TVLEEVKHQNTAVFQRLLDIISNKKRKFYSFVNEHHKDT- 475
L +ID+ EED + L TV++EVK + + + + + E H D
Sbjct: 433 LSEIDLTEEDGEEFISHLDLTVVDEVKGDDDDENENEM---TEDHDEVEEAAEEQHDDVE 489
Query: 476 YIERSPGEKQND 511
+IE PGEK ND
Sbjct: 490 FIEEEPGEKSND 501
>AE014134-525|AAN10404.1| 443|Drosophila melanogaster CG9641-PB,
isoform B protein.
Length = 443
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 302 LHQIDVLEEDALTNVIILQ-TVLEEVKHQNTAVFQRLLDIISNKKRKFYSFVNEHHKDT- 475
L +ID+ EED + L TV++EVK + + + + + E H D
Sbjct: 341 LSEIDLTEEDGEEFISHLDLTVVDEVKGDDDDENENEM---TEDHDEVEEAAEEQHDDVE 397
Query: 476 YIERSPGEKQND 511
+IE PGEK ND
Sbjct: 398 FIEEEPGEKSND 409
>AE014134-524|AAF51173.1| 535|Drosophila melanogaster CG9641-PA,
isoform A protein.
Length = 535
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 302 LHQIDVLEEDALTNVIILQ-TVLEEVKHQNTAVFQRLLDIISNKKRKFYSFVNEHHKDT- 475
L +ID+ EED + L TV++EVK + + + + + E H D
Sbjct: 433 LSEIDLTEEDGEEFISHLDLTVVDEVKGDDDDENENEM---TEDHDEVEEAAEEQHDDVE 489
Query: 476 YIERSPGEKQND 511
+IE PGEK ND
Sbjct: 490 FIEEEPGEKSND 501
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 298 CVTSNRCFGGRCFD*CYHFTN-CT 366
C+ C GG+C C +FTN CT
Sbjct: 8137 CLDEQTCIGGQCISPCEYFTNLCT 8160
>AY051633-1|AAK93057.1| 279|Drosophila melanogaster GH28353p
protein.
Length = 279
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 209 KDDELVLETSPDS---PCALFDFPHYLVLDTNVVLHQIDVLEEDALTNVIILQTV 364
+DD +++ + D+ P L D+ Y VLDTNV++H +E LT+V++ TV
Sbjct: 105 EDDTILMLQAADAEELPPRLEDYM-YFVLDTNVLIHNHKFVER--LTDVVLPGTV 156
>AE014298-2660|AAF48796.2| 279|Drosophila melanogaster CG7206-PA,
isoform A protein.
Length = 279
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 209 KDDELVLETSPDS---PCALFDFPHYLVLDTNVVLHQIDVLEEDALTNVIILQTV 364
+DD +++ + D+ P L D+ Y VLDTNV++H +E LT+V++ TV
Sbjct: 105 EDDTILMLQAADAEELPPRLEDYM-YFVLDTNVLIHNHKFVER--LTDVVLPGTV 156
>AE014298-2659|AAS65397.1| 404|Drosophila melanogaster CG7206-PB,
isoform B protein.
Length = 404
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 209 KDDELVLETSPDS---PCALFDFPHYLVLDTNVVLHQIDVLEEDALTNVIILQTV 364
+DD +++ + D+ P L D+ Y VLDTNV++H +E LT+V++ TV
Sbjct: 230 EDDTILMLQAADAEELPPRLEDYM-YFVLDTNVLIHNHKFVER--LTDVVLPGTV 281
>AY058276-1|AAL13505.1| 399|Drosophila melanogaster GH02863p
protein.
Length = 399
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 155 YLRDDLLCGSAACNTCPHKDDELVLET 235
Y R D LCG+ C P++D+E ET
Sbjct: 262 YFRRDGLCGNFLCGRSPNEDEEPECET 288
>AE013599-207|AAM70815.1| 440|Drosophila melanogaster CG3270-PA
protein.
Length = 440
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 155 YLRDDLLCGSAACNTCPHKDDELVLET 235
Y R D LCG+ C P++D+E ET
Sbjct: 303 YFRRDGLCGNFLCGRSPNEDEEPECET 329
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,833,777
Number of Sequences: 53049
Number of extensions: 598881
Number of successful extensions: 1649
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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