Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19m06
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   3.0  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   9.3  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   9.3  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   9.3  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   9.3  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 235 RVTVKGGGHVAQVYAIRQAISKALIAFYQKYV-DEASKKEI 354
           RV     G VA V A+ + I+ A   FY KYV D+  +K I
Sbjct: 140 RVFGISSGCVAFVMALERYIALAKPFFYHKYVTDKLIRKSI 180


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 280 IRQAISK---ALIAFYQKYVDEASKKEIK 357
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 280 IRQAISK---ALIAFYQKYVDEASKKEIK 357
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 280 IRQAISK---ALIAFYQKYVDEASKKEIK 357
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +1

Query: 280 IRQAISK---ALIAFYQKYVDEASKKEIK 357
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,698
Number of Sequences: 2352
Number of extensions: 12450
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)