Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19m05
(324 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p pro... 27 4.2
AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-P... 27 4.2
AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA... 27 5.6
AY052032-1|AAK93456.1| 402|Drosophila melanogaster LP01339p pro... 27 7.3
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein... 27 7.3
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ... 27 7.3
AE013599-1693|AAF58383.1| 402|Drosophila melanogaster CG10814-P... 27 7.3
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 26 9.7
AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro... 26 9.7
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ... 26 9.7
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 26 9.7
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 26 9.7
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P... 26 9.7
>BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p
protein.
Length = 1417
Score = 27.5 bits (58), Expect = 4.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 69 DPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSA---SIQASLPSSEIYRQLVDSRHVSSD 239
+ S TP F+ N T L + +LLS +QA L S + L++SR V +
Sbjct: 599 EESVLCQTPAFEAFSCINCNTTLVERINSLLSCQFQQLQALLSLSHLRSDLLNSR-VCQE 657
Query: 240 SFGV 251
FG+
Sbjct: 658 EFGI 661
>AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-PA
protein.
Length = 1621
Score = 27.5 bits (58), Expect = 4.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 69 DPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSA---SIQASLPSSEIYRQLVDSRHVSSD 239
+ S TP F+ N T L + +LLS +QA L S + L++SR V +
Sbjct: 803 EESVLCQTPAFEAFSCINCNTTLVERINSLLSCQFQQLQALLSLSHLRSDLLNSR-VCQE 861
Query: 240 SFGV 251
FG+
Sbjct: 862 EFGI 865
>AE014298-2655|AAF48792.1| 4081|Drosophila melanogaster CG7092-PA
protein.
Length = 4081
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 96 PFDTVLYDNIRTVLKDNKTALLSASIQASL 185
P D V +N+ TVL DNK L+ S + L
Sbjct: 1779 PVDAVWIENLNTVLDDNKMLCLANSERIKL 1808
>AY052032-1|AAK93456.1| 402|Drosophila melanogaster LP01339p
protein.
Length = 402
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 75 SCYFSTPPFDTVLYDNIRTV 134
SC F T P D + +DN+R V
Sbjct: 344 SCRFKTTPGDVLTFDNLRLV 363
>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
protein.
Length = 2797
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 96 PFDTVLYDNIRTVLKDNKTALLS 164
P D V +N+ +VL DNKT L+
Sbjct: 739 PVDAVWIENLNSVLDDNKTLTLA 761
>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
protein.
Length = 4671
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 96 PFDTVLYDNIRTVLKDNKTALLS 164
P D++ +N+ +VL DNKT L+
Sbjct: 2336 PVDSIWIENLNSVLDDNKTLTLA 2358
>AE013599-1693|AAF58383.1| 402|Drosophila melanogaster CG10814-PA
protein.
Length = 402
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 75 SCYFSTPPFDTVLYDNIRTV 134
SC F T P D + +DN+R V
Sbjct: 344 SCRFKTTPGDVLTFDNLRLV 363
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 49 APESTSSIPPATFQLLPSIPYCTTTSG 129
A +ST+ PPA P PY TT G
Sbjct: 2263 AVQSTTLPPPAQVNQYPGTPYSATTLG 2289
>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p
protein.
Length = 1412
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 303 MKLTTQNCEE*GIKILRRLQRSRKKHGENLPTG 205
++L + E+ G+K+LR + RS + +GE + G
Sbjct: 321 LRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVG 353
>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
stability factor protein.
Length = 1412
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 303 MKLTTQNCEE*GIKILRRLQRSRKKHGENLPTG 205
++L + E+ G+K+LR + RS + +GE + G
Sbjct: 321 LRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVG 353
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 49 APESTSSIPPATFQLLPSIPYCTTTSG 129
A +ST+ PPA P PY TT G
Sbjct: 2263 AVQSTTLPPPAQVNQYPGTPYSATTLG 2289
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 49 APESTSSIPPATFQLLPSIPYCTTTSG 129
A +ST+ PPA P PY TT G
Sbjct: 2223 AVQSTTLPPPAQVNQYPGTPYSATTLG 2249
>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
protein.
Length = 1412
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 303 MKLTTQNCEE*GIKILRRLQRSRKKHGENLPTG 205
++L + E+ G+K+LR + RS + +GE + G
Sbjct: 321 LRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDVG 353
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,399,681
Number of Sequences: 53049
Number of extensions: 239134
Number of successful extensions: 625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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