Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19m02
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ328873-1|ABC61103.1|  121|Homo sapiens immunoglobulin heavy ch...    29   9.6  
AF461041-1|AAL67803.1| 2316|Homo sapiens AF15q14 isoform 2 protein.    29   9.6  
AF173994-1|AAM45143.1| 2342|Homo sapiens AF15q14 protein.              29   9.6  
AB046790-1|BAB13396.1| 1360|Homo sapiens KIAA1570 protein protein.     29   9.6  

>DQ328873-1|ABC61103.1|  121|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 13/61 (21%), Positives = 28/61 (45%)
 Frame = +1

Query: 58  VGYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRT 237
           +GY+ Y+GH N     +KS + +  ++ +  FS ++  + +  T  +    +      R 
Sbjct: 48  IGYIYYSGHTNYN-PSLKSRVTISVDTSKNQFSLMLSSVTAADTAVYYCARDFYYGDPRG 106

Query: 238 W 240
           W
Sbjct: 107 W 107


>AF461041-1|AAL67803.1| 2316|Homo sapiens AF15q14 isoform 2 protein.
          Length = 2316

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 14/69 (20%), Positives = 32/69 (46%)
 Frame = +1

Query: 61   GYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTW 240
            G +   G L    Q  +  L +  + M+K    + + +  ++T+T  +    +NN +  W
Sbjct: 1989 GKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEW 2048

Query: 241  DAVVKNGKK 267
            D+ ++  +K
Sbjct: 2049 DSEMRAAEK 2057


>AF173994-1|AAM45143.1| 2342|Homo sapiens AF15q14 protein.
          Length = 2342

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 14/69 (20%), Positives = 32/69 (46%)
 Frame = +1

Query: 61   GYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTW 240
            G +   G L    Q  +  L +  + M+K    + + +  ++T+T  +    +NN +  W
Sbjct: 2015 GKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEW 2074

Query: 241  DAVVKNGKK 267
            D+ ++  +K
Sbjct: 2075 DSEMRAAEK 2083


>AB046790-1|BAB13396.1| 1360|Homo sapiens KIAA1570 protein protein.
          Length = 1360

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 14/69 (20%), Positives = 32/69 (46%)
 Frame = +1

Query: 61   GYLVYAGHLNNELQEIKSILVVMYESMEKHFSNVVDEIDSLKTDTFMMLSNLQNNTIRTW 240
            G +   G L    Q  +  L +  + M+K    + + +  ++T+T  +    +NN +  W
Sbjct: 1033 GKVALYGKLVQSAQNEREKLQIKIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEW 1092

Query: 241  DAVVKNGKK 267
            D+ ++  +K
Sbjct: 1093 DSEMRAAEK 1101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,948,033
Number of Sequences: 237096
Number of extensions: 1545086
Number of successful extensions: 7238
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7238
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)