BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19m01
(347 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015271-1|AAT94500.1| 687|Drosophila melanogaster LD23193p pro... 83 1e-16
AE014134-2332|AAF53287.1| 687|Drosophila melanogaster CG12396-P... 83 1e-16
AF005630-1|AAB70469.1| 1708|Drosophila melanogaster adenylyl cyc... 28 3.7
AY052050-1|AAK93474.1| 329|Drosophila melanogaster LP07079p pro... 27 6.5
AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anem... 27 6.5
AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-P... 27 6.5
>BT015271-1|AAT94500.1| 687|Drosophila melanogaster LD23193p
protein.
Length = 687
Score = 82.6 bits (195), Expect = 1e-16
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 126 EQVAVVAQEIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYEFKEXDFTRVWKGIFYA 305
+++ VVAQE+K R L+ N+ R R I+ L+KW + + F E DF R+WKG++Y
Sbjct: 32 KELMVVAQEVKIIRALACNDVVERNRQIRILRKWFKARAGSSFPFNEDDFMRIWKGLYYT 91
Query: 306 MWMSDKPLVXEDLA 347
MWMSDKPLV E+LA
Sbjct: 92 MWMSDKPLVQEELA 105
>AE014134-2332|AAF53287.1| 687|Drosophila melanogaster CG12396-PA
protein.
Length = 687
Score = 82.6 bits (195), Expect = 1e-16
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 126 EQVAVVAQEIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYEFKEXDFTRVWKGIFYA 305
+++ VVAQE+K R L+ N+ R R I+ L+KW + + F E DF R+WKG++Y
Sbjct: 32 KELMVVAQEVKIIRALACNDVVERNRQIRILRKWFKARAGSSFPFNEDDFMRIWKGLYYT 91
Query: 306 MWMSDKPLVXEDLA 347
MWMSDKPLV E+LA
Sbjct: 92 MWMSDKPLVQEELA 105
>AF005630-1|AAB70469.1| 1708|Drosophila melanogaster adenylyl cyclase
isoform DAC9 protein.
Length = 1708
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 174 SGNENKVRERVIKTLKKWLQNC 239
SGN K+R IK L+KW QNC
Sbjct: 1688 SGNLGKLRG--IKALEKWFQNC 1707
>AY052050-1|AAK93474.1| 329|Drosophila melanogaster LP07079p
protein.
Length = 329
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 243 HRGYEFKEXDFTR---VWKGIFYAMWMSDK 323
H G+E+ D R +WK ++ +W +DK
Sbjct: 174 HEGWEYTSHDLWRKKLIWKPVWKKVWRTDK 203
>AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anemia
complementationgroup D2 protein protein.
Length = 1478
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 217 SVLITRSRTLFSFPDNKRANF 155
S+L T+ + L SFP+ K+ANF
Sbjct: 1236 SILNTKDKALTSFPNFKKANF 1256
>AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-PA
protein.
Length = 1478
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 217 SVLITRSRTLFSFPDNKRANF 155
S+L T+ + L SFP+ K+ANF
Sbjct: 1236 SILNTKDKALTSFPNFKKANF 1256
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,117,276
Number of Sequences: 53049
Number of extensions: 187331
Number of successful extensions: 408
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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