Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19m01
         (347 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   0.59 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   1.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   9.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   9.6  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   9.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   9.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease
          precursor protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 0.59
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 1  DYYQNLHSGGMYF 39
          DYYQNL+ G +Y+
Sbjct: 43 DYYQNLNLGEIYY 55


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 248 GIRIQRX*FHESVEGYI 298
           G+RIQ     E+VEGY+
Sbjct: 229 GLRIQSDSLAENVEGYV 245


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +2

Query: 143 CPGDKVRAFVIW 178
           CP D++  F+ W
Sbjct: 357 CPSDRMVYFITW 368


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +2

Query: 143 CPGDKVRAFVIW 178
           CP D++  F+ W
Sbjct: 357 CPSDRMVYFITW 368


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 295 IPFHTLVKSXSLNSYP 248
           +P H+  KS  L  YP
Sbjct: 217 VPKHSKTKSPKLRPYP 232


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +2

Query: 143 CPGDKVRAFVIW 178
           CP D++  F+ W
Sbjct: 357 CPSDRMVYFITW 368


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,010
Number of Sequences: 438
Number of extensions: 1166
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)