Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19l19
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 300 FPAFINAHQPEQSLLCQDVQRRKHRNEFC 214
           FP     HQ +  + C +       NE+C
Sbjct: 475 FPLLSQRHQIDAKMFCNESSVSNCENEYC 503


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 342 IIIYLVFLVCATAHF 298
           III LVF VC T ++
Sbjct: 278 IIIVLVFFVCWTPYY 292


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 342 IIIYLVFLVCATAHF 298
           III LVF VC T ++
Sbjct: 278 IIIVLVFFVCWTPYY 292


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 551 LLISAYNSAMCFLYVDALNNTSF 619
           ++I  Y+S M   Y+D + N +F
Sbjct: 217 IMIILYSSLMVLNYIDEVFNNNF 239


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -1

Query: 345 FII--IYLVFLVCATAHFPAFI 286
           FII  ++L+FL+C    F AFI
Sbjct: 153 FIIFTVHLLFLLCIYHFFCAFI 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,493
Number of Sequences: 336
Number of extensions: 2918
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)