Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19l18
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   3.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   3.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.3  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = -3

Query: 84  EKIKSLTKNVNELQNMEKRVMKSRQNFL 1
           EK++SLT+ +N+     ++ +K+++N L
Sbjct: 754 EKLQSLTQELNQSDEELEQAIKNQRNLL 781


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = -3

Query: 84  EKIKSLTKNVNELQNMEKRVMKSRQNFL 1
           EK++SLT+ +N+     ++ +K+++N L
Sbjct: 754 EKLQSLTQELNQSDEELEQAIKNQRNLL 781


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 451 YVIVFLLSGARFDQYHLVICGF 516
           +++  +LSG RF +  L +CGF
Sbjct: 920 FLLAQILSGHRFFREFLHVCGF 941


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/44 (22%), Positives = 25/44 (56%)
 Frame = -3

Query: 234 IKRCCFTSSVYFFKMFSKNYNASQSQRDLKSKLEEINRHKQKIT 103
           +KR    +++  F+ F+K+++A+     + S+LE++     + T
Sbjct: 13  LKRVEIMNTLQDFEEFTKSFDATIDAYQIPSRLEQLEELVSEFT 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,122
Number of Sequences: 2352
Number of extensions: 12909
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)