Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19l07
         (165 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LNV1 Cluster: Predicted protein; n=5; Saccharomycetal...    36   0.14 
UniRef50_Q0J6I5 Cluster: Os08g0315000 protein; n=1; Oryza sativa...    35   0.41 
UniRef50_A1D2N7 Cluster: Putative uncharacterized protein; n=2; ...    31   5.1  

>UniRef50_A3LNV1 Cluster: Predicted protein; n=5;
           Saccharomycetales|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 432

 Score = 36.3 bits (80), Expect = 0.14
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +3

Query: 12  NVDDLYYSVTVSPHLCYS*CG-RMRKRNITVPHDRLAPRNVRSGLPPRL 155
           N++DLY +  + PHL    CG R R  N+ + +D +A + +   LPPRL
Sbjct: 287 NIEDLYSTFEMFPHLIEP-CGPRYRLANVMLENDDMAGKELDYDLPPRL 334


>UniRef50_Q0J6I5 Cluster: Os08g0315000 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os08g0315000 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 132

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 68  VRQNAKTQHHCPS*STRSSQRTIGTPPPTP 157
           +R +   +HH P  S  SS+R  GTPPP P
Sbjct: 53  LRMHGAREHHAPPASPPSSRRKTGTPPPLP 82


>UniRef50_A1D2N7 Cluster: Putative uncharacterized protein; n=2;
           Trichocomaceae|Rep: Putative uncharacterized protein -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 463

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +3

Query: 15  VDDLYYSVTVSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGL 143
           VD+L Y+V++   LC++  G +  RNI++ H R +   VRS L
Sbjct: 60  VDELGYAVSLGRRLCWTDPGAIPGRNISI-HSRSSEDGVRSVL 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,635,625
Number of Sequences: 1657284
Number of extensions: 2460253
Number of successful extensions: 7651
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7648
length of database: 575,637,011
effective HSP length: 34
effective length of database: 519,289,355
effective search space used: 10385787100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)