Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19l07
         (165 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0530 - 6928528-6929500,6929514-6930964                           27   2.0  
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568...    27   2.7  
06_01_0454 - 3234331-3236299,3237254-3238074                           26   3.6  
06_03_1226 - 28541522-28541755,28543095-28543740,28544017-28545575     26   4.7  
02_05_1184 + 34802749-34802892,34802981-34803220,34803636-348039...    26   4.7  
09_06_0127 + 21019266-21019670                                         25   8.3  

>04_01_0530 - 6928528-6929500,6929514-6930964
          Length = 807

 Score = 27.1 bits (57), Expect = 2.0
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 42  VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRL 155
           +SP+LCY+ C   RK+       +L+  +  SGLPP++
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKI 506


>01_06_1801 -
           39954425-39954533,39955289-39955578,39955786-39956838,
           39956998-39957263,39957345-39957420,39957525-39957605,
           39957676-39957831,39958565-39958669,39958761-39959367,
           39959514-39959585,39959802-39959953,39960063-39960240,
           39960642-39960745,39960822-39960953,39961036-39961132,
           39961280-39961407,39961533-39961592,39962799-39962918,
           39963011-39963091,39963173-39963361,39963826-39964024,
           39964177-39964257,39964398-39964588,39965226-39965382,
           39965986-39966119,39966266-39966334,39966434-39966481,
           39966572-39966646,39967112-39967192,39967399-39967461,
           39967564-39967623,39967754-39967795,39968777-39968902,
           39969027-39969176
          Length = 1843

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 49  LTCAIASAAECENATSLSL-MIDSLLATYDRD 141
           L C I S   C+N++S+++ +I SL+  +D D
Sbjct: 177 LLCQIGSDLACQNSSSVTMSIIKSLIGHFDLD 208


>06_01_0454 - 3234331-3236299,3237254-3238074
          Length = 929

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 53  LVL*LVRQNAKTQHHCPS*STRSSQRTIGTPPPTPK 160
           +VL  V +N     H PS   R +   IG PP TP+
Sbjct: 859 IVLDEVGENDSVFEHLPSTLCRVNVDIIGNPPSTPR 894


>06_03_1226 - 28541522-28541755,28543095-28543740,28544017-28545575
          Length = 812

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +1

Query: 55  CAIASAAECENATSLSLM--IDSLL-ATYDRDSPPD 153
           CA+   AEC+ +TS SL   +D+L  A YD D   D
Sbjct: 50  CAVLRDAECKQSTSHSLQEWLDNLKDAVYDIDDVLD 85


>02_05_1184 +
           34802749-34802892,34802981-34803220,34803636-34803950,
           34804030-34804209,34804312-34804504,34805062-34805324,
           34805461-34805590,34805719-34805786,34805951-34806199,
           34806284-34806357,34808052-34808143,34808603-34808685,
           34810337-34810408,34810558-34810683,34810996-34811037
          Length = 756

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 152 SGGESRSYVARSESIMRDSDVAFSHSAALAIAQVRRNGNRI 30
           S G+ +      + I + SDV  SHSA +    V  NG  +
Sbjct: 339 SFGDRQEIKLHRQGIYKASDVTLSHSAQIGANSVVGNGTSV 379


>09_06_0127 + 21019266-21019670
          Length = 134

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 110 STRSSQRTIGTPPPTP 157
           ST SS R++  PPP P
Sbjct: 64  STASSSRSVNAPPPPP 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,149,820
Number of Sequences: 37544
Number of extensions: 80395
Number of successful extensions: 271
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 14,793,348
effective HSP length: 35
effective length of database: 13,479,308
effective search space used: 256106852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)