Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19l07
         (165 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL022018-2|CAA17685.2| 1279|Drosophila melanogaster EG:8D8.2 pro...    26   6.1  
AE014298-178|AAF45604.1| 1279|Drosophila melanogaster CG11409-PB...    26   6.1  

>AL022018-2|CAA17685.2| 1279|Drosophila melanogaster EG:8D8.2
           protein.
          Length = 1279

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 71  RQNAKTQHHCPS*STRSSQRTIGTPPPTP 157
           R + K QH   + ST S+  T  TP PTP
Sbjct: 601 RNSKKKQHPKTTSSTTSTTSTTTTPRPTP 629


>AE014298-178|AAF45604.1| 1279|Drosophila melanogaster CG11409-PB
           protein.
          Length = 1279

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 71  RQNAKTQHHCPS*STRSSQRTIGTPPPTP 157
           R + K QH   + ST S+  T  TP PTP
Sbjct: 601 RNSKKKQHPKTTSSTTSTTSTTTTPRPTP 629


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,428,576
Number of Sequences: 53049
Number of extensions: 129249
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 24,988,368
effective HSP length: 35
effective length of database: 23,131,653
effective search space used: 439501407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)