Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19l05
(313 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 21 4.0
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 20 5.3
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 20 5.3
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 20 6.9
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 19 9.2
DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase rever... 19 9.2
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 19 9.2
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 19 9.2
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 19 9.2
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 19 9.2
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 19 9.2
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 20.6 bits (41), Expect = 4.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -3
Query: 125 LPWLFDTISVSFAVLVMI 72
L W + TIS++F + V +
Sbjct: 3 LKWYYITISMAFIIFVSL 20
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 20.2 bits (40), Expect = 5.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 96 HRNGIKKPRKTRHESTLGMDPKFL 167
HRNG+ +P TL P F+
Sbjct: 480 HRNGMYRPSIYFISKTLAESPIFI 503
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 20.2 bits (40), Expect = 5.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 96 HRNGIKKPRKTRHESTLGMDPKFL 167
HRNG+ +P TL P F+
Sbjct: 480 HRNGMYRPSIYFISKTLAESPIFI 503
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 19.8 bits (39), Expect = 6.9
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = -3
Query: 119 WLFDTISVSFAVLVMICMIL*LCHFDAFSIHL 24
+L T +A ++++C+ F F++HL
Sbjct: 96 FLLCTYYFYYAFIILLCVYYFYYAFIIFTVHL 127
Score = 19.8 bits (39), Expect = 6.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -3
Query: 86 VLVMICMIL*LCHFDAFSIHL 24
+L ++C+ C F F++HL
Sbjct: 160 LLFLLCIYHFFCAFIIFTMHL 180
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -3
Query: 77 MICMIL*LCHFDAFSIHL 24
++C+ C F F++HL
Sbjct: 143 LLCIYYFYCAFIIFTVHL 160
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 241 LPEKQRPRN 267
+P+K RPRN
Sbjct: 247 VPDKNRPRN 255
>DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 73
Score = 19.4 bits (38), Expect = 9.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 165 LRNQRFCKKGNLKPAKQL 218
L+N R CKK K Q+
Sbjct: 31 LKNFRLCKKHKTKKPVQI 48
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 19.4 bits (38), Expect = 9.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 165 LRNQRFCKKGNLKPAKQL 218
L+N R CKK K Q+
Sbjct: 31 LKNFRLCKKHKTKKPVQI 48
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 19.4 bits (38), Expect = 9.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 303 IFYAFICLYLMFISWPLLLG 244
++ FI +L+F + +LLG
Sbjct: 140 LYSQFILYFLLFATLKILLG 159
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 19.4 bits (38), Expect = 9.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 303 IFYAFICLYLMFISWPLLLG 244
++ FI +L+F + +LLG
Sbjct: 140 LYSQFILYFLLFATLKILLG 159
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 19.4 bits (38), Expect = 9.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 303 IFYAFICLYLMFISWPLLLG 244
++ FI +L+F + +LLG
Sbjct: 460 LYSQFILYFLLFATLKILLG 479
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 19.4 bits (38), Expect = 9.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 306 FIFYAFICLYLMF 268
F+ Y F+ YL+F
Sbjct: 137 FVRYVFVTSYLLF 149
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,137
Number of Sequences: 336
Number of extensions: 1537
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 5730534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -