Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19l02
         (285 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   1.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   1.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   1.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   2.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   2.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 232  DDFHACWLTIPSSLWNS 182
            +  H  W T PS+ W+S
Sbjct: 1029 EHMHPDWTTKPSTWWSS 1045


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 220 ACWLTIPSSLWNSFLEV 170
           +CW    + LW S L V
Sbjct: 392 SCWAQFKAVLWRSILAV 408


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 220 ACWLTIPSSLWNSFLEV 170
           +CW    + LW S L V
Sbjct: 392 SCWAQFKAVLWRSILAV 408


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 204 FLLHFGTAFWRCAGR 160
           F+LH     WRC  R
Sbjct: 152 FMLHCNNTTWRCLYR 166


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 157 VGPRCDSDV 131
           VGPRC+ D+
Sbjct: 291 VGPRCEGDI 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,980
Number of Sequences: 336
Number of extensions: 1296
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)