Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k23
         (667 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1DBM8 Cluster: Putative uncharacterized protein; n=1; ...    36   0.66 
UniRef50_Q8SXD4 Cluster: GH03394p; n=1; Drosophila melanogaster|...    35   1.5  
UniRef50_Q4SW41 Cluster: Chromosome 3 SCAF13691, whole genome sh...    34   2.7  
UniRef50_Q9W4T4 Cluster: cAMP-specific 3',5'-cyclic phosphodiest...    33   4.7  
UniRef50_Q75DX0 Cluster: ABL097Cp; n=1; Eremothecium gossypii|Re...    33   6.2  
UniRef50_Q4SKZ5 Cluster: Chromosome 17 SCAF14563, whole genome s...    33   8.2  

>UniRef50_Q1DBM8 Cluster: Putative uncharacterized protein; n=1;
           Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
           protein - Myxococcus xanthus (strain DK 1622)
          Length = 355

 Score = 36.3 bits (80), Expect = 0.66
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = +2

Query: 467 VPSDRNTLSHSCTERHAHLFLPPAATVSVEGGDACASEYPGTASSKSAGVCSSAGQQMDG 646
           +P  R+  +   T  HA++ LPP   VSV+   +CA+       S+ +G CS  G +MDG
Sbjct: 249 LPPGRHRATLKATLEHANITLPP---VSVDFELSCAARVANAGMSQMSG-CSDGGTEMDG 304


>UniRef50_Q8SXD4 Cluster: GH03394p; n=1; Drosophila
           melanogaster|Rep: GH03394p - Drosophila melanogaster
           (Fruit fly)
          Length = 1122

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 527 LPPAATVSVEGGDACASEYPGTASSKSAGVCSSAGQQMDGVTNRI 661
           LP  A  S      C+S  P ++SS S+G C++ G Q D +  ++
Sbjct: 471 LPTTAATSSSSSCNCSSAAPSSSSSTSSGACATGGCQQDPIAAKL 515


>UniRef50_Q4SW41 Cluster: Chromosome 3 SCAF13691, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
           SCAF13691, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 559

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
 Frame = +2

Query: 350 CVGRARH----LRRRMSPGIVP*N-RCLEHNYT--REIVRLMTTLPVPSDRNTLSHSCTE 508
           CV R RH    +   +S G +P   RCLE N    R + R +  LP+ +  N    +  E
Sbjct: 401 CVWRIRHFFCSVCSSLSAGTLPVTFRCLEENLKIDRRVTRFV--LPIGATINMDGTALYE 458

Query: 509 RHAHLFLPPAATVSVEGGDACASEYPGTASSKSAGVCSSAG 631
             A +F+     +S++GG         T +S  A    SAG
Sbjct: 459 AVAAIFIAQMNDISLDGGQIVTVSMTATLASVGAASIPSAG 499


>UniRef50_Q9W4T4 Cluster: cAMP-specific 3',5'-cyclic
           phosphodiesterase, isoform I; n=38; Coelomata|Rep:
           cAMP-specific 3',5'-cyclic phosphodiesterase, isoform I
           - Drosophila melanogaster (Fruit fly)
          Length = 1209

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +2

Query: 473 SDRNTLSHSCTERHAHLFLPPAATVSVEGGDACASEYPGTASSKSAGVCSSAGQQ 637
           SD+    H  T    H  LPP  T++     +C S +  +A+S SAG     GQQ
Sbjct: 334 SDQANFKHQ-TSLKEHQPLPPPITIATGYCGSCESVHHSSATSSSAGTVPPGGQQ 387


>UniRef50_Q75DX0 Cluster: ABL097Cp; n=1; Eremothecium gossypii|Rep:
           ABL097Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 119

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 322 CNYYRRDRAVCRKSKTPTPQDVSWHSSVK 408
           C++ +RD AVC K K P  QD+  H S +
Sbjct: 37  CDFRQRDLAVCIKQKVPVVQDIMKHCSAQ 65


>UniRef50_Q4SKZ5 Cluster: Chromosome 17 SCAF14563, whole genome
           shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 17
           SCAF14563, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 760

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 536 LEAKISARGVRYKSATAYCDQTVLVK-WSLISRSHEYNYVPNNGFTELCQETSCGVGVLL 360
           ++  ++ RG+R K     C      K WSL     +Y++V NN  T++    S  +GV L
Sbjct: 387 IDVAVTYRGIRRKGNANECSLGWNDKSWSLYCSDSKYSFVHNNKSTDIAGPVSSRIGVYL 446


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,355,476
Number of Sequences: 1657284
Number of extensions: 12673654
Number of successful extensions: 34452
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34436
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)