Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k20
         (464 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    29   0.021
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   2.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   9.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 29.1 bits (62), Expect = 0.021
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 24  KRLTIYICNNFLIFTLKSARMIERTVTRWHLLSDNVLLK-IGEVAQRLNYYLQEY 185
           +  T Y+CN  +     S   I+R  T   +  DN++   I E+  R  ++L E+
Sbjct: 150 RSFTYYVCNTTIFLIFHSVLPIKRFFTSLGIAFDNIMKNLICEIDGRHEFFLAEF 204


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 63  FTLKSARMIERTVTRWHLLSDNVLLKIGEVAQRLN 167
           FTL+ A +    +     L D V LKIGE+   +N
Sbjct: 269 FTLQWAFLQILEILALAYLCDKVQLKIGEIKYSVN 303


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 294 PPWTWNCAKKS*QCRFLR 241
           P WTW C  +  + R ++
Sbjct: 54  PQWTWQCINQRCERRHIK 71


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 202 KLRKKLNIWKLMTAKKSTLSRLFCA 276
           KL      WK++    ++   LFCA
Sbjct: 52  KLHFTFKSWKVLYTSLTSFGYLFCA 76


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 249 IDTVKTFLRNSMST 290
           + TVKT L+ +MST
Sbjct: 388 LHTVKTVLKTTMST 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,950
Number of Sequences: 336
Number of extensions: 1551
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)