Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k17
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    29   0.025
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.6  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 29.5 bits (63), Expect = 0.025
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -2

Query: 283 SLFYTCTFPNVYRQLLQTRPNARRIAPLRRFVCRRCTCERKQSYQSL 143
           +L++   F    R  LQ +  A ++ P R+F+C+ C  +  +SY  L
Sbjct: 50  ALYHKLQFRGPPRTPLQPKLVAGKLKPKRQFICKYCNRQFTKSYNLL 96


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 445 NVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNEL 564
           N ++F    K L   L ++KN  + CF N+  +    N+L
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCF-NLYHLASKSNQL 300


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 445 NVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNEL 564
           N ++F    K L   L ++KN  + CF N+  +    N+L
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCF-NLYHLASKSNQL 300


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 28  MIRTSSHVLNVQENIMTSNCASSPYSCEATSAC 126
           M++     LNVQ   +T NCA+   S      C
Sbjct: 547 MLKNRFVTLNVQLTKLTKNCATKAQSVVLGRIC 579


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 67  NIMTSNCASSPYSCEATSACAEAQQVMID 153
           +I++   A   +S  A+ AC E + VM+D
Sbjct: 92  DILSGAIACIGFSWIASPACTELEVVMLD 120


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 162 FLSHVHRRHTNRRKGAMRRAFGR 230
           F+SH+H    N+    +   FGR
Sbjct: 231 FMSHIHNDGDNKPDTILVNGFGR 253


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 289 IYSLFYTCTF 260
           I+ LFY CTF
Sbjct: 20  IHPLFYVCTF 29


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 287 LFSILYLYISKCLSSIIANAAERTPHCTFASICM 186
           LF++ Y+Y S   +SII           F S C+
Sbjct: 153 LFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCI 186


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 289 IYSLFYTCTF 260
           I+ LFY CTF
Sbjct: 20  IHPLFYVCTF 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,858
Number of Sequences: 336
Number of extensions: 3315
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)