Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k17
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC043409-1|AAH43409.1|  422|Homo sapiens KCNH5 protein protein.        31   4.5  
BC048287-1|AAH48287.1|  760|Homo sapiens SEC63 homolog (S. cerev...    30   6.0  
BC047221-1|AAH47221.1|  760|Homo sapiens SEC63 homolog (S. cerev...    30   6.0  
AL024507-3|CAI19745.1|  760|Homo sapiens SEC63 homolog (S. cerev...    30   6.0  
AJ011779-1|CAB46275.1|  760|Homo sapiens SEC63 protein protein.        30   6.0  
AF100141-1|AAC83375.1|  760|Homo sapiens SEC63 protein.                30   6.0  

>BC043409-1|AAH43409.1|  422|Homo sapiens KCNH5 protein protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -3

Query: 336 TVGFGNVGTLIIVIKKFILYSILV---HFQMFIVNYC 235
           T+GFGN+     V K F +  ++V   +F  FI NYC
Sbjct: 374 TIGFGNIAPTTDVEKMFSVAMMMVGCKYFNFFIENYC 410


>BC048287-1|AAH48287.1|  760|Homo sapiens SEC63 homolog (S.
           cerevisiae) protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>BC047221-1|AAH47221.1|  760|Homo sapiens SEC63 homolog (S.
           cerevisiae) protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>AL024507-3|CAI19745.1|  760|Homo sapiens SEC63 homolog (S.
           cerevisiae protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>AJ011779-1|CAB46275.1|  760|Homo sapiens SEC63 protein protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>AF100141-1|AAC83375.1|  760|Homo sapiens SEC63 protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,991,821
Number of Sequences: 237096
Number of extensions: 1761776
Number of successful extensions: 4284
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4284
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)