Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k17
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003192-1|AAO24947.1|  814|Drosophila melanogaster RE60845p pro...    29   4.0  
AY058591-1|AAL13820.1|  618|Drosophila melanogaster LD28370p pro...    29   4.0  
AE014296-3521|AAF51709.1|  814|Drosophila melanogaster CG7338-PA...    29   4.0  
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    29   5.3  
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    29   5.3  
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P...    29   5.3  
AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,...    28   9.2  

>BT003192-1|AAO24947.1|  814|Drosophila melanogaster RE60845p
           protein.
          Length = 814

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +1

Query: 139 QVMIDNFVFFHMYTADIQIDAK----VQCGVRSAAFAIIDDKHLEMYKYRIENKFFYYYD 306
           Q+ + N V   M  +++ + +K    +QCG R      I  +H    K++ E  F  Y  
Sbjct: 596 QMCVMNVVLQRMPDSEVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYET 655

Query: 307 QCADIAKPDRLP 342
            CA    P + P
Sbjct: 656 VCATFYAPIQFP 667


>AY058591-1|AAL13820.1|  618|Drosophila melanogaster LD28370p
           protein.
          Length = 618

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +1

Query: 139 QVMIDNFVFFHMYTADIQIDAK----VQCGVRSAAFAIIDDKHLEMYKYRIENKFFYYYD 306
           Q+ + N V   M  +++ + +K    +QCG R      I  +H    K++ E  F  Y  
Sbjct: 400 QMCVMNVVLQRMPDSEVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYET 459

Query: 307 QCADIAKPDRLP 342
            CA    P + P
Sbjct: 460 VCATFYAPIQFP 471


>AE014296-3521|AAF51709.1|  814|Drosophila melanogaster CG7338-PA
           protein.
          Length = 814

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +1

Query: 139 QVMIDNFVFFHMYTADIQIDAK----VQCGVRSAAFAIIDDKHLEMYKYRIENKFFYYYD 306
           Q+ + N V   M  +++ + +K    +QCG R      I  +H    K++ E  F  Y  
Sbjct: 596 QMCVMNVVLQRMPDSEVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYET 655

Query: 307 QCADIAKPDRLP 342
            CA    P + P
Sbjct: 656 VCATFYAPIQFP 667


>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
           protein.
          Length = 3712

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -2

Query: 193 FVCRRCTCERKQSYQSLPAELLRK-RTLPR-TNMAMTHSLTSLYFP 62
           F C+ C+C+   S+QS+  ++  + +  PR T +A T  LT+ +FP
Sbjct: 780 FGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFP 825


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A
           protein.
          Length = 3712

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -2

Query: 193 FVCRRCTCERKQSYQSLPAELLRK-RTLPR-TNMAMTHSLTSLYFP 62
           F C+ C+C+   S+QS+  ++  + +  PR T +A T  LT+ +FP
Sbjct: 780 FGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFP 825


>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
           protein.
          Length = 3712

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -2

Query: 193 FVCRRCTCERKQSYQSLPAELLRK-RTLPR-TNMAMTHSLTSLYFP 62
           F C+ C+C+   S+QS+  ++  + +  PR T +A T  LT+ +FP
Sbjct: 780 FGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFP 825


>AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,
           isoform B protein.
          Length = 1399

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 430 VRDRGNVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQ--MYVNELISNCLLFIEKAGN 603
           + D+G + +  P  K  +   KL         K +N M   + +N+ ISN L +++ +GN
Sbjct: 262 IEDKGAIHLAGPIAKVSKGLCKLALAHCGLTSKGVNQMSHSLTLNQSISNSLTYLDLSGN 321


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,328,542
Number of Sequences: 53049
Number of extensions: 582299
Number of successful extensions: 1563
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)