Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k11
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   2.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   2.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   2.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   2.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   3.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   8.8  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/40 (22%), Positives = 18/40 (45%)
 Frame = +1

Query: 85  LNDDITSEPQQFSEPVYKMPIDDMMVGYNNTTSNVSAGII 204
           +ND+   E   F +     P D  +VG+ +   N+   ++
Sbjct: 362 MNDEAQQEINMFLKATEMSPTDISLVGFFDVNRNLFKSLL 401


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 89  TMISPANRNNLASPFTK 139
           T ++ ANRN+ A P T+
Sbjct: 263 TSMNDANRNDCAKPLTQ 279


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 112 QQFSEPVYKMPIDDMMVGYNNTTSNV 189
           +QF  P++ M  D++ +G  N+T ++
Sbjct: 353 KQFKPPLFHMGGDEVHLGCWNSTPSI 378


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 89  TMISPANRNNLASPFTK 139
           T ++ ANRN+ A P T+
Sbjct: 263 TSMNDANRNDCAKPLTQ 279


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 94  HR*APISTGCIPPFRGCPTDSMARP 20
           H  API    +PP R  P+   + P
Sbjct: 61  HHKAPIRPVALPPKREIPSPKRSSP 85


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 125 SLNCCGSLVISSLSANFNGMYST 57
           SLN  G ++ S  + +FNG+  T
Sbjct: 352 SLNLAGVMIWSIETDDFNGLSGT 374


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -3

Query: 144 WHFVNGLAKLLRFAGDIIVERQFQRDVFHLFV 49
           W F+  + K+L F    +     Q+   HL V
Sbjct: 463 WKFIEFIRKVLEFDVKCVSNYTKQQSKIHLIV 494


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 225 FYSFIFTIVCNILFRNIK 278
           +Y F+   + NIL R+ K
Sbjct: 180 YYEFLLISLINILIRSFK 197


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 89  TMISPANRNNLASPFTK 139
           T ++  NRN+ A P T+
Sbjct: 263 TSMNDVNRNDCAKPLTQ 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,073
Number of Sequences: 336
Number of extensions: 1160
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)