Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19k09
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009557-1|AAH09557.1| 118|Homo sapiens hypothetical protein P1... 33 0.72
AB167391-1|BAE80091.1| 118|Homo sapiens hypothetical protein P1... 33 0.72
BC042386-1|AAH42386.1| 118|Homo sapiens hypothetical protein P1... 32 1.3
BC047440-1|AAH47440.1| 200|Homo sapiens COMM domain containing ... 32 1.7
AY542162-1|AAS22244.1| 200|Homo sapiens COMMD7 protein. 32 1.7
CR383702-1|CAI95302.2| 200|Homo sapiens COMM domain containing ... 30 5.1
BX640505-1|CAM28357.1| 200|Homo sapiens COMM domain containing ... 30 5.1
BC000628-1|AAH00628.3| 200|Homo sapiens COMM domain containing ... 30 5.1
AL035071-1|CAI19095.2| 200|Homo sapiens COMM domain containing ... 30 5.1
AK027893-1|BAB55436.1| 200|Homo sapiens protein ( Homo sapiens ... 30 5.1
M95678-1|AAA36453.1| 1181|Homo sapiens phospholipase C-beta-2 pr... 29 8.9
AB209583-1|BAD92820.1| 901|Homo sapiens phospholipase C, beta 2... 29 8.9
>BC009557-1|AAH09557.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.72
Identities = 19/110 (17%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +3
Query: 111 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 278
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 279 ELPALPSNDRISYLFKYYWNCSVKATFRFLVELPTHTSNAVFKTYDFISS 428
++P LP+ +I + + WN + L P+ + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>AB167391-1|BAE80091.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.72
Identities = 19/110 (17%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +3
Query: 111 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 278
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 279 ELPALPSNDRISYLFKYYWNCSVKATFRFLVELPTHTSNAVFKTYDFISS 428
++P LP+ +I + + WN + L P+ + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>BC042386-1|AAH42386.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 32.3 bits (70), Expect = 1.3
Identities = 19/110 (17%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +3
Query: 111 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 278
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGVAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 279 ELPALPSNDRISYLFKYYWNCSVKATFRFLVELPTHTSNAVFKTYDFISS 428
++P LP+ +I + + WN + L P+ + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>BC047440-1|AAH47440.1| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 445 SGVSKDDEIKSYVLKTALLVWVGNSTKNLNVALTL-QFQ*YLNKYD 311
SG S+ +++ S L+ L+V GN TKN+ + LTL QF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190
>AY542162-1|AAS22244.1| 200|Homo sapiens COMMD7 protein.
Length = 200
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 445 SGVSKDDEIKSYVLKTALLVWVGNSTKNLNVALTL-QFQ*YLNKYD 311
SG S+ +++ S L+ L+V GN TKN+ + LTL QF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190
>CR383702-1|CAI95302.2| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 445 SGVSKDDEIKSYVLKTALLVWVGNSTKNLNVALTL-QFQ*YLNKYD 311
SG S+ +++ S L+ L+V GN T+N+ + LTL QF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>BX640505-1|CAM28357.1| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 445 SGVSKDDEIKSYVLKTALLVWVGNSTKNLNVALTL-QFQ*YLNKYD 311
SG S+ +++ S L+ L+V GN T+N+ + LTL QF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>BC000628-1|AAH00628.3| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 445 SGVSKDDEIKSYVLKTALLVWVGNSTKNLNVALTL-QFQ*YLNKYD 311
SG S+ +++ S L+ L+V GN T+N+ + LTL QF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>AL035071-1|CAI19095.2| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 445 SGVSKDDEIKSYVLKTALLVWVGNSTKNLNVALTL-QFQ*YLNKYD 311
SG S+ +++ S L+ L+V GN T+N+ + LTL QF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>AK027893-1|BAB55436.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ14987 fis, clone Y79AA1001077. ).
Length = 200
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -3
Query: 445 SGVSKDDEIKSYVLKTALLVWVGNSTKNLNVALTL-QFQ*YLNKYD 311
SG S+ +++ S L+ L+V GN T+N+ + LTL QF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>M95678-1|AAA36453.1| 1181|Homo sapiens phospholipase C-beta-2
protein.
Length = 1181
Score = 29.5 bits (63), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +3
Query: 195 SATTAAIYDELEKGMSPYVGELKSQVPYELPALPSNDRISYLFKYYWN--CSVKATFRFL 368
S T YD L K +V K Q+ P D +Y+ + +WN C + A
Sbjct: 571 SFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQT 630
Query: 369 VELPTHTSNAVFK 407
++LP + AVF+
Sbjct: 631 MDLPMQQNMAVFE 643
>AB209583-1|BAD92820.1| 901|Homo sapiens phospholipase C, beta 2
variant protein.
Length = 901
Score = 29.5 bits (63), Expect = 8.9
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +3
Query: 195 SATTAAIYDELEKGMSPYVGELKSQVPYELPALPSNDRISYLFKYYWN--CSVKATFRFL 368
S T YD L K +V K Q+ P D +Y+ + +WN C + A
Sbjct: 582 SFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQT 641
Query: 369 VELPTHTSNAVFK 407
++LP + AVF+
Sbjct: 642 MDLPMQQNMAVFE 654
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,340,799
Number of Sequences: 237096
Number of extensions: 1525386
Number of successful extensions: 5275
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5275
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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