Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k08
         (630 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SKZ5 Cluster: Chromosome 17 SCAF14563, whole genome s...    36   0.80 
UniRef50_UPI000023C9B6 Cluster: hypothetical protein FG00211.1; ...    36   1.1  
UniRef50_UPI000065E81A Cluster: Homolog of Homo sapiens "Splice ...    35   1.9  
UniRef50_Q4SI60 Cluster: Chromosome 5 SCAF14581, whole genome sh...    34   3.2  
UniRef50_Q2HFS0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_Q0URD4 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   7.5  
UniRef50_A4RNK7 Cluster: Predicted protein; n=2; Magnaporthe gri...    33   7.5  
UniRef50_Q7QUA1 Cluster: GLP_155_41978_36969; n=1; Giardia lambl...    32   9.9  

>UniRef50_Q4SKZ5 Cluster: Chromosome 17 SCAF14563, whole genome
           shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 17
           SCAF14563, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 760

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -1

Query: 534 LEAKITARGVRYKSATAYCD*TVPVK-WSLISRSHEYNYVLNNGSTELCQETSCGVGVML 358
           ++  +T RG+R K     C      K WSL     +Y++V NN ST++    S  +GV L
Sbjct: 387 IDVAVTYRGIRRKGNANECSLGWNDKSWSLYCSDSKYSFVHNNKSTDIAGPVSSRIGVYL 446


>UniRef50_UPI000023C9B6 Cluster: hypothetical protein FG00211.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG00211.1 - Gibberella zeae PH-1
          Length = 285

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
 Frame = +2

Query: 140 GQFCVIYFFLLTTSLLV--DNIRIGIKPRAFEK*RDVDVENTGAIILIDAVMTARILDLG 313
           G+ C +     TT L V  D I   I+        +  + N G II+I  ++   IL L 
Sbjct: 110 GEDCSLISVRKTTRLFVIGDFITFNIQGNGGGLLANEKLANAGKIIVIVGLIAQIILFLA 169

Query: 314 --VCCN-YHRRDRAVCRKSMTPTPQDVSWHSSVEPLFRT 421
             VCC  +HRR R   R+S TP   ++ W + +  L+ T
Sbjct: 170 FVVCCVVFHRRFRVHLRQSHTPV--EIRWEAYLNMLYMT 206


>UniRef50_UPI000065E81A Cluster: Homolog of Homo sapiens "Splice
           Isoform 1 of Tripartite motif protein 16; n=1; Takifugu
           rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
           of Tripartite motif protein 16 - Takifugu rubripes
          Length = 446

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -1

Query: 534 LEAKITARGVRYKSATAYCD*TVPVK-WSLISRSHEYNYVLNNGSTELCQETSCGVGVML 358
           ++  +T RG+R K     C      K WSL     +Y++V NN ST++    S  +GV L
Sbjct: 356 IDIAVTYRGIRRKGNGNECSLGWNDKSWSLYCSDSKYSFVHNNKSTDIAGPVSSRIGVYL 415


>UniRef50_Q4SI60 Cluster: Chromosome 5 SCAF14581, whole genome shotgun
            sequence; n=3; Clupeocephala|Rep: Chromosome 5 SCAF14581,
            whole genome shotgun sequence - Tetraodon nigroviridis
            (Green puffer)
          Length = 991

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -3

Query: 610  PADFHDAVPGYSGAHASPPSTETVAAGGKNNCAWRSVQECDSVLRLDGTGKVVINLT 440
            P     A P YSG H SPP     + G  +       Q  DS+ +LDG+    + L+
Sbjct: 861  PMHLSPATPHYSGHH-SPPLLNQTSNGNPSQAVLEFAQYLDSLFKLDGSSSPPLELS 916


>UniRef50_Q2HFS0 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1896

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = -1

Query: 324 LQQTPKSRIRAVMTASMRMIAPVFSTSTSRHFSKARGFIPILILSTRSEVVNK 166
           +  TP+  +RA++ A  R++A V    T+ HF+ ARG   IL +     V N+
Sbjct: 591 MSSTPEV-VRALVDAGARLVARVADGRTALHFAAARGHAEILKILLDKSVANE 642


>UniRef50_Q0URD4 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 246

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 432 REIVRLMTTLPVPSNRNTLSHSCTERHAQLFLP 530
           R  V L   LPVP + NT +H C  RH   + P
Sbjct: 81  RRRVHLPLALPVPQSSNTTAHPCCARHTPNWFP 113


>UniRef50_A4RNK7 Cluster: Predicted protein; n=2; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 371

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 320 CNYHRRDRAVCRKSMTPTPQDVSWHSSVEPLFRT 421
           CN ++RD  VCR ++ P   ++ W   + P F +
Sbjct: 140 CNTNQRDPKVCRANLVPLLPEIMWQYPMNPAFES 173


>UniRef50_Q7QUA1 Cluster: GLP_155_41978_36969; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_155_41978_36969 - Giardia lamblia
            ATCC 50803
          Length = 1669

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 245  DVENTGAIILIDAVMTARILDLGVCCNYHRRDRAVCRKS 361
            DV  TG +IL DA    ++LD       H RDR +C +S
Sbjct: 1627 DVPGTGKLILRDAPHKNKMLDKSELVLIHFRDRCICMRS 1665


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,970,662
Number of Sequences: 1657284
Number of extensions: 11817821
Number of successful extensions: 30451
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30444
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)