Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k07
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   5.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.7  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   8.7  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 496 KIYSHFLAGVKQ*LKAVNMLRSINFNIK*SCFFLYVLH 383
           K  SH     K+ +KA+N L +   NI   C  +  LH
Sbjct: 778 KFKSHLEEACKKVMKAINALAAFTPNIGGPCSSIRRLH 815


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 66  TLLFQVVPN*APVCLVFYELII 1
           T  F  VPN  P+ LVF + ++
Sbjct: 369 TFCFDTVPNERPMILVFQDPLV 390


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 295 EQMIKNDLLSCCR 333
           E +++N LL+CCR
Sbjct: 16  EVVVQNSLLNCCR 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,261
Number of Sequences: 2352
Number of extensions: 7261
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)