Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19k06
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 119  KPAGVLVKRRVLSARKLA*LGYNLLTLRRFV 27
            KP G L+   V  +R++   GY++ TL +++
Sbjct: 1977 KPKGWLLSAAVSPSRRVVDAGYDVPTLSKYL 2007



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +2

Query: 320  WTTCQTFITTPNRRDPMQSDKTSQRPTCARPKVFKT 427
            WTT  +   +     P  +  T++R T  RP    T
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTST 1070



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +3

Query: 240  QRCPQHTQCISGHFRPSN 293
            + C     C++GH  P N
Sbjct: 1216 ESCSSFYVCVNGHLVPQN 1233


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 531 GGGKQKITAAGQEYAHSCYFQGS 463
           G    K+T +   Y HS Y Q +
Sbjct: 236 GASASKVTLSVPFYGHSWYLQST 258


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 32  IFVESINCILIRPVFLLII 88
           I + S+ C+++  VFLL +
Sbjct: 129 IIIISLGCLILAVVFLLTL 147


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 32  IFVESINCILIRPVFLLII 88
           I + S+ C+++  VFLL +
Sbjct: 129 IIIISLGCLILAVVFLLTL 147


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 32  IFVESINCILIRPVFLLII 88
           I + S+ C+++  VFLL +
Sbjct: 129 IIIISLGCLILAVVFLLTL 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,779
Number of Sequences: 336
Number of extensions: 3077
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)