Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19k05
(311 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 130 4e-30
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 120 6e-27
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 116 8e-26
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 105 3e-22
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 102 1e-21
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 95 3e-19
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 89 2e-17
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 88 4e-17
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 70 1e-11
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 67 8e-11
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 65 3e-10
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 65 3e-10
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 62 3e-09
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 61 5e-09
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 59 2e-08
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 57 9e-08
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 57 9e-08
UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa... 44 7e-04
UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169, w... 44 9e-04
UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative; ... 43 0.002
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 42 0.004
UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.004
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 41 0.005
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 34 0.71
UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora cras... 33 1.6
UniRef50_Q76IK9 Cluster: Pol-like protein; n=8; Clupeocephala|Re... 32 2.9
UniRef50_Q600T7 Cluster: Putative uncharacterized protein; n=5; ... 32 2.9
UniRef50_A5GSE8 Cluster: Permease of the major facilitator super... 31 5.0
UniRef50_A0CYS6 Cluster: Chromosome undetermined scaffold_31, wh... 31 5.0
UniRef50_Q9ZH92 Cluster: Decorin binding protein A; n=9; Borreli... 31 6.6
UniRef50_A6DNV3 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q7RWI3 Cluster: DNA-directed RNA polymerase; n=4; Peziz... 31 6.6
UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Se... 30 8.7
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 130 bits (315), Expect = 4e-30
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 231
MPREIKDIKDFL+KARRKDAKSVKIKKN +NVKFKVRCSRFLYTLVITDKEKAEKLKQSL
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 60
Query: 232 PPGLQ 246
PPGLQ
Sbjct: 61 PPGLQ 65
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 120 bits (289), Expect = 6e-27
Identities = 56/64 (87%), Positives = 62/64 (96%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 231
MPR+I++IKDFL+ ARRKDAKSVKIKKN +NVKFKVRCSR+LYTLVITDKEKAEKLKQSL
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
Query: 232 PPGL 243
PPGL
Sbjct: 61 PPGL 64
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 116 bits (280), Expect = 8e-26
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 231
MP+EIK+IKDFL+KARRKDAKSVKIKKN N KFKVRC+ +LYTLV+ DK+KAEKLKQSL
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSL 60
Query: 232 PPGLQ 246
PPG+Q
Sbjct: 61 PPGIQ 65
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 105 bits (251), Expect = 3e-22
Identities = 49/58 (84%), Positives = 55/58 (94%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 225
+PREI++IKDFL+ A+RKDAKSVKIKKN +NVKFKVRCSR LYTLVITDKEKAEKLKQ
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ 74
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 102 bits (245), Expect = 1e-21
Identities = 46/64 (71%), Positives = 58/64 (90%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 231
MP++I +IKDFL+ ARRKDA+SVKIK++ + VKFKVRCSR+LYTL + D+EKA+KLKQSL
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
Query: 232 PPGL 243
PPGL
Sbjct: 61 PPGL 64
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 95.1 bits (226), Expect = 3e-19
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 100 RKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 243
RKDAKSVKIKKN +NVKFKVRCS++LYTLVITDKEKAEKLKQSLPPGL
Sbjct: 366 RKDAKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGL 413
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 88.6 bits (210), Expect = 2e-17
Identities = 38/65 (58%), Positives = 52/65 (80%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 231
MPREIK +K+FL RKDA+ VK+K NP KFKVRCSR+LYTLV+ DK+KA+K+++S+
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLYTLVVNDKKKADKIERSI 60
Query: 232 PPGLQ 246
P ++
Sbjct: 61 HPSVK 65
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 87.8 bits (208), Expect = 4e-17
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPEN--VKFKVRCSRFLYTLVITDKEKAEKLKQ 225
MP E+ DIK F+ RRKDA S +IK+N + +KFKVRC RFLYTLV+ D +KA+KLKQ
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQ 60
Query: 226 SLPPGLQ 246
SLPP L+
Sbjct: 61 SLPPSLK 67
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 69.7 bits (163), Expect = 1e-11
Identities = 39/74 (52%), Positives = 48/74 (64%), Gaps = 9/74 (12%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNP---------ENVKFKVRCSRFLYTLVITDKE 204
M REIKDIK+F+ ARR D KS +K N + KFKVR SR+ YTLV+ D
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKALNANGKKIKQTKFKVRGSRYQYTLVVNDAA 60
Query: 205 KAEKLKQSLPPGLQ 246
KA+KL+QSLPP L+
Sbjct: 61 KAKKLQQSLPPTLE 74
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 66.9 bits (156), Expect = 8e-11
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 231
MP+++++ K L + ++V++K N EN KFKVRC+++LYT + DK KAE+LK+++
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLYTYICADKAKAEELKKAI 60
Query: 232 P 234
P
Sbjct: 61 P 61
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 65.3 bits (152), Expect = 3e-10
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +1
Query: 64 IKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 243
+ IKDFL R D +SV +K + + KFK+RC R LYTL + D+ KA+K+ QSLP +
Sbjct: 18 LTSIKDFLATCSRDDVESVTVKYSANDTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSI 77
Query: 244 Q 246
+
Sbjct: 78 K 78
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPE-----NVKFKVRCSRFLYTLVITDKEKAEK 216
MP+E+KD+KD+L +R DAKSV + K + KFKVRCSR+LYT + ++ KA K
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAK 60
Query: 217 LKQSLPPGLQ 246
++ ++P L+
Sbjct: 61 VEATIPSNLE 70
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 61.7 bits (143), Expect = 3e-09
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 204
M +EI DIK+FL RR+D S +K N + KFK+R SR+LYTL++ D
Sbjct: 1 MAKEIADIKEFLELIRRQDVNSATVKINKKLNKNGKAFRQTKFKLRGSRYLYTLIVNDAG 60
Query: 205 KAEKLKQSLPP 237
KA+KL QSLPP
Sbjct: 61 KAKKLLQSLPP 71
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 60.9 bits (141), Expect = 5e-09
Identities = 38/74 (51%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 204
M REI DIK FL RR D K+ +K N + KFKVR S LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 205 KAEKLKQSLPPGLQ 246
KA+KL QSLPP L+
Sbjct: 61 KAKKLIQSLPPTLK 74
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 40 FVFNMPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEK 216
F +MP+++ K+FL A R DAK VK+KK + EN KFK+R +++LYTL + K E
Sbjct: 21 FFTSMPKQVTTPKEFLALAARSDAKWVKVKKSSDENTKFKLRTTKYLYTLTVKPK-FVEL 79
Query: 217 LKQSLPPGLQ 246
++ S+P L+
Sbjct: 80 VQNSIPESLE 89
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 56.8 bits (131), Expect = 9e-08
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSV-------KIKKNPENVKFKVRCSRFLYTLVITDKEKA 210
MP++I DI+ FL +R+ D +V K KKN K K+R ++LYT+V DK+KA
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTKKNTIITKLKLRTKKYLYTMVFADKKKA 60
Query: 211 EKLKQSLPPGLQ 246
E+++ SL P L+
Sbjct: 61 ERIENSLLPSLK 72
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 56.8 bits (131), Expect = 9e-08
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 228
MP+++ K+FL A R DAK VK+KK N + KFK+R ++FLYTLV+ K E ++ S
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKKVNDDLTKFKLRTTKFLYTLVVKPK-FVELVQNS 59
Query: 229 LPPGLQ 246
+P L+
Sbjct: 60 IPESLE 65
>UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0546700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 94
Score = 44.0 bits (99), Expect = 7e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 51 HAA*NQRYQRLFN*GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 209
HA + R Q L GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 16 HAEADPRDQGLPPDGEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 68
>UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_169,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 177
Score = 43.6 bits (98), Expect = 9e-04
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Frame = +1
Query: 52 MPREIKDIKDFLI-----KARRKDA-----KSVKIKKNPENVKFKVRCSRFLYTLVITDK 201
MP+EI+D+K+FL +A+ KDA K++ IK++ + KFK+R ++L+T DK
Sbjct: 1 MPKEIQDVKEFLSLMKGSEAQGKDANKEPKKNLYIKESKKITKFKLRGKKYLFTFKTADK 60
Query: 202 EKAEKLKQSLP 234
KA + + P
Sbjct: 61 NKASRNSINTP 71
>UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-1, putative - Trichomonas vaginalis G3
Length = 93
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 228
MP+++ + F+ + DAK+V I + N E KFK++ ++ LYTL + E +++ S
Sbjct: 1 MPKQVLTARQFVERCMAPDAKNVVILRVNDETAKFKLKTTKQLYTLTVKKGELIQQVIDS 60
Query: 229 LP 234
LP
Sbjct: 61 LP 62
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +3
Query: 93 GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 209
GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 15 GEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 53
>UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 89
Score = 41.5 bits (93), Expect = 0.004
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +1
Query: 52 MPREIKDIKDFL-IKARRKDA-------KSVKIKKNPENVKFKVRCSRFLYTLVITDKEK 207
MP+EI DIK F+ + KD K V +K N KFK+R ++LYT D +
Sbjct: 1 MPKEITDIKKFMKLWQNNKDTPATAGAKKVVYVKTNKRITKFKLRGKKYLYTFKTADPKI 60
Query: 208 AEKLKQSLP 234
A+ +K ++P
Sbjct: 61 AKGIKDAIP 69
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +1
Query: 52 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 225
MP E+K +F+ R A ++K+ + VK K R R+LYTL + +++AE L+Q
Sbjct: 1 MPVELKSFDEFVKVVER--AVECRVKRGKDVVKIKARTKRYLYTLKVPPEKEAEVLEQ 56
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 33.9 bits (74), Expect = 0.71
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 149 SSRFDAQGSCTPWSSLTKRRLRNLSR 226
SSR DA +CTP S+T RRLR+ SR
Sbjct: 114 SSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1007
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 89 LRRGGKTPNRSK*RRTLRMSSSRFDAQGSCTPWSSLTKRRLRNLSRVYLQVSK 247
L+ G +TP RS + + RMS SR DA+ + SS++ S+ + S+
Sbjct: 280 LKEGDQTPERSDSKSSNRMSRSRSDARSKLSKVSSVSSEATETQSQTFTSQSR 332
>UniRef50_Q76IK9 Cluster: Pol-like protein; n=8; Clupeocephala|Rep:
Pol-like protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1148
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/59 (20%), Positives = 32/59 (54%)
Frame = +1
Query: 46 FNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 222
F+ EIK++K ++ ++++ V ++ + ++ +C+R+ + +IT K+K
Sbjct: 335 FDFNNEIKEVKKEMLVLAEENSRGVILRAKEKKIEENEKCTRYFFKKIITKGGGISKIK 393
>UniRef50_Q600T7 Cluster: Putative uncharacterized protein; n=5;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 232)
Length = 524
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 37 LFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRF 174
+F FN + IKDI+D + + R K + V + P N KF S F
Sbjct: 335 IFYFNYAKFIKDIEDLINRVRAKGQEFVNSIELPANEKFDNFVSNF 380
>UniRef50_A5GSE8 Cluster: Permease of the major facilitator
superfamily; n=1; Synechococcus sp. RCC307|Rep: Permease
of the major facilitator superfamily - Synechococcus sp.
(strain RCC307)
Length = 522
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 156 LELDILRVLLYFDRFGVFPPRLN*KVFDIFDF 61
L ++ V+L+F RF PP LN KVF +F
Sbjct: 238 LTFSLIHVILFFIRFASSPPLLNPKVFSDINF 269
>UniRef50_A0CYS6 Cluster: Chromosome undetermined scaffold_31, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_31,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 749
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +1
Query: 43 VFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 222
+FN+ + I+ +++ L +A+ + S K+ ++ +N+K K + + +V E EK
Sbjct: 155 LFNLKKIIQSLQESLQQAQVTELDSNKLYRDLQNMKLKYAKLQNQFEIVQRQNEYTEKNM 214
Query: 223 QSLPPGLQ 246
QS+ LQ
Sbjct: 215 QSIKQHLQ 222
>UniRef50_Q9ZH92 Cluster: Decorin binding protein A; n=9; Borrelia
burgdorferi group|Rep: Decorin binding protein A -
Borrelia afzelii
Length = 181
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 121 KIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 228
K+ +NP +K K+R + + KE+AEKLK+S
Sbjct: 67 KVAENPFIIKAKIRTTSVALKFIQAIKEEAEKLKES 102
>UniRef50_A6DNV3 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 689
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1
Query: 61 EIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPG 240
++ D++ F D ++ + +P V ++ L L++++K+ E K +PPG
Sbjct: 622 KVADLRSFPAFFTSLDVPNLDLSLSPVKVTQEILGMNKLKNLILSEKQFKETKKLKIPPG 681
Query: 241 LQ 246
LQ
Sbjct: 682 LQ 683
>UniRef50_Q7RWI3 Cluster: DNA-directed RNA polymerase; n=4;
Pezizomycotina|Rep: DNA-directed RNA polymerase -
Neurospora crassa
Length = 1674
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +1
Query: 40 FVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLV 189
F M + +K+ KD LIK ++ D+ + ++KN E K+ ++++ +LV
Sbjct: 1134 FFEKMTKYVKENKDGLIKEKKGDSSGIIVRKNAE----KILAAKYIRSLV 1179
>UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Sel1
repeat family - Vibrio harveyi HY01
Length = 326
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 121 KIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 222
KIK PEN K + C+ F YT KA KL+
Sbjct: 257 KIKGQPENQKLLIACAMFGYTPQTIPDSKAVKLR 290
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,200,712
Number of Sequences: 1657284
Number of extensions: 3897662
Number of successful extensions: 10847
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 10660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10828
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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